Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 AC023310.3-201ENST00000557027 670 ntBASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 AC100756.1-201ENST00000562736 682 ntBASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 RRP7BP-205ENST00000566851 833 ntBASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 AC138749.3-201ENST00000567691 622 ntBASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 AC004233.3-201ENST00000607794 1269 ntBASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 AC116165.1-201ENST00000611806 668 ntBASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 AC084364.1-201ENST00000551967 1556 ntBASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 DFFBP1-201ENST00000433250 979 ntBASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 GNAQP1-201ENST00000444815 1067 ntBASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 SSR4P1-203ENST00000599569 2260 ntBASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC148Q8NFR7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 AC099568.2-201ENST00000609194 695 ntBASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 AC126177.1-201ENST00000547829 2218 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms