Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRFBP1Q8NEF9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 AC135586.1-201ENST00000539323 574 ntBASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 AC009407.1-201ENST00000568958 598 ntBASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 AC005498.2-205ENST00000593218 784 ntBASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 AL390955.2-201ENST00000603032 514 ntBASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 AF228730.6-201ENST00000641497 218 ntBASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 AC084121.3-201ENST00000641716 218 ntBASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.91□□□□□ -0.02
SRFBP1Q8NEF9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 AL365209.1-201ENST00000624418 6473 ntBASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 MIR770-201ENST00000390219 98 ntBASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 INGX-202ENST00000489074 768 ntBASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 MEIS3P1-201ENST00000495167 958 ntBASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 AC027796.2-201ENST00000575326 344 ntBASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms