Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AC005089.1-201ENST00000619486 2241 ntBASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 LINC01115-203ENST00000606068 577 ntBASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 AF228730.6-201ENST00000641497 218 ntBASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 AC084121.3-201ENST00000641716 218 ntBASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 AL109936.8-201ENST00000641772 604 ntBASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SIMC1Q8NDZ2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 AC087499.5-201ENST00000452760 1342 ntBASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 AC009407.1-201ENST00000568958 598 ntBASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 MIR6069-201ENST00000620069 79 ntBASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms