Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 TIMM8BP1-201ENST00000452384 211 ntBASIC13.05□□□□□ -0.32
COMMD1Q8N668 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 IGHV3-62-201ENST00000520057 340 ntBASIC13.05□□□□□ -0.32
COMMD1Q8N668 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.05□□□□□ -0.32
COMMD1Q8N668 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 AL031731.1-201ENST00000642131 2094 ntBASIC13.04□□□□□ -0.32
COMMD1Q8N668 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 PCGF3-213ENST00000620529 1899 ntBASIC13.04□□□□□ -0.32
COMMD1Q8N668 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 KRT18P34-201ENST00000488218 1270 ntBASIC13.04□□□□□ -0.32
COMMD1Q8N668 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 AL135744.1-201ENST00000565098 629 ntBASIC13.04□□□□□ -0.32
COMMD1Q8N668 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 AC022145.2-201ENST00000598203 171 ntBASIC13.04□□□□□ -0.32
COMMD1Q8N668 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 KRT18P28-201ENST00000453838 1332 ntBASIC13.04□□□□□ -0.32
COMMD1Q8N668 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
COMMD1Q8N668 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COMMD1Q8N668 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms