Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 CLK3P2-201ENST00000427566 1453 ntBASIC12.6□□□□□ -0.39
LINC00311Q8N616 AC012508.2-201ENST00000567613 1472 ntBASIC12.6□□□□□ -0.39
LINC00311Q8N616 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 MIR770-201ENST00000390219 98 ntBASIC12.6□□□□□ -0.39
LINC00311Q8N616 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 RPL13AP25-201ENST00000484130 612 ntBASIC12.6□□□□□ -0.39
LINC00311Q8N616 AC093004.1-201ENST00000508850 424 ntBASIC12.6□□□□□ -0.39
LINC00311Q8N616 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 AC099568.2-201ENST00000609194 695 ntBASIC12.6□□□□□ -0.39
LINC00311Q8N616 AJ011932.1-201ENST00000621707 465 ntBASIC12.6□□□□□ -0.39
LINC00311Q8N616 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 ZBED1P1-201ENST00000502364 1930 ntBASIC12.6□□□□□ -0.39
LINC00311Q8N616 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00311Q8N616 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
LINC00311Q8N616 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00311Q8N616 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00311Q8N616 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 HYMAI-201ENST00000635591 3347 ntBASIC12.59□□□□□ -0.39
LINC00311Q8N616 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00311Q8N616 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00311Q8N616 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00311Q8N616 CICP11-201ENST00000434745 2827 ntBASIC12.59□□□□□ -0.39
LINC00311Q8N616 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00311Q8N616 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00311Q8N616 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00311Q8N616 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00311Q8N616 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00311Q8N616 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 RN7SL399P-201ENST00000471648 279 ntBASIC12.59□□□□□ -0.39
LINC00311Q8N616 FAM86LP-201ENST00000478302 853 ntBASIC12.59□□□□□ -0.39
LINC00311Q8N616 AC004066.1-201ENST00000502488 802 ntBASIC12.59□□□□□ -0.39
LINC00311Q8N616 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00311Q8N616 SAMD11P1-201ENST00000571429 661 ntBASIC12.59□□□□□ -0.39
LINC00311Q8N616 AC027796.2-201ENST00000575326 344 ntBASIC12.59□□□□□ -0.39
LINC00311Q8N616 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00311Q8N616 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00311Q8N616 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 AC067930.6-201ENST00000623257 4947 ntBASIC12.59□□□□□ -0.39
LINC00311Q8N616 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00311Q8N616 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LINC00311Q8N616 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00311Q8N616 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms