Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC170Q8IYT3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 FAM58CP-201ENST00000435741 640 ntBASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 KRT8P48-201ENST00000515599 1220 ntBASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 RARRES2P9-201ENST00000565168 469 ntBASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC170Q8IYT3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC170Q8IYT3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 KRT18P3-201ENST00000451602 1288 ntBASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC170Q8IYT3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms