Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 AC005077.2-201ENST00000449786 690 ntBASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 EEF1DP1-201ENST00000585891 896 ntBASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 ECM1P1-201ENST00000604092 1279 ntBASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 AC006453.4-201ENST00000636949 1252 ntBASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 AC015818.8-201ENST00000587907 1519 ntBASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEFF1Q8IYR6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 AC004898.1-201ENST00000451057 766 ntBASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 SCARNA20.5-201ENST00000516991 142 ntBASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 AC106872.11-201ENST00000605838 421 ntBASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 AL096828.3-201ENST00000615354 462 ntBASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEFF1Q8IYR6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 AC138028.6-201ENST00000616106 1482 ntBASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 AL354989.2-201ENST00000435838 1540 ntBASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms