Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLX4Q8IY92 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SLX4Q8IY92 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLX4Q8IY92 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLX4Q8IY92 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLX4Q8IY92 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.54■□□□□ 0.56
SLX4Q8IY92 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.53■□□□□ 0.56
SLX4Q8IY92 OR2K2-202ENST00000374428 1038 ntBASIC18.53■□□□□ 0.56
SLX4Q8IY92 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.53■□□□□ 0.56
SLX4Q8IY92 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLX4Q8IY92 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.53■□□□□ 0.56
SLX4Q8IY92 AC090857.1-201ENST00000527400 390 ntBASIC18.53■□□□□ 0.56
SLX4Q8IY92 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SLX4Q8IY92 AP001065.2-201ENST00000617205 644 ntBASIC18.53■□□□□ 0.56
SLX4Q8IY92 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLX4Q8IY92 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLX4Q8IY92 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SLX4Q8IY92 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLX4Q8IY92 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.53■□□□□ 0.56
SLX4Q8IY92 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.53■□□□□ 0.56
SLX4Q8IY92 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLX4Q8IY92 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLX4Q8IY92 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLX4Q8IY92 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLX4Q8IY92 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.53■□□□□ 0.56
SLX4Q8IY92 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLX4Q8IY92 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SLX4Q8IY92 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLX4Q8IY92 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.53■□□□□ 0.56
SLX4Q8IY92 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.53■□□□□ 0.56
SLX4Q8IY92 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.53■□□□□ 0.56
SLX4Q8IY92 AC100827.2-201ENST00000563214 1194 ntBASIC18.53■□□□□ 0.56
SLX4Q8IY92 DUX4L46-201ENST00000566845 751 ntBASIC18.53■□□□□ 0.56
SLX4Q8IY92 AC008805.1-201ENST00000590892 364 ntBASIC18.53■□□□□ 0.56
SLX4Q8IY92 AC138696.2-201ENST00000607376 223 ntBASIC18.53■□□□□ 0.56
SLX4Q8IY92 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLX4Q8IY92 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLX4Q8IY92 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
SLX4Q8IY92 AC112504.1-201ENST00000623415 1841 ntBASIC18.52■□□□□ 0.56
SLX4Q8IY92 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLX4Q8IY92 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLX4Q8IY92 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18.52■□□□□ 0.56
SLX4Q8IY92 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.52■□□□□ 0.56
SLX4Q8IY92 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.52■□□□□ 0.56
SLX4Q8IY92 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.52■□□□□ 0.56
SLX4Q8IY92 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.52■□□□□ 0.56
SLX4Q8IY92 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.52■□□□□ 0.56
SLX4Q8IY92 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLX4Q8IY92 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.52■□□□□ 0.56
SLX4Q8IY92 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
SLX4Q8IY92 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
SLX4Q8IY92 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLX4Q8IY92 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLX4Q8IY92 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.52■□□□□ 0.55
SLX4Q8IY92 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
SLX4Q8IY92 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLX4Q8IY92 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLX4Q8IY92 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 MIR3677-201ENST00000578964 60 ntBASIC18.51■□□□□ 0.55
SLX4Q8IY92 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLX4Q8IY92 NAP1L6-202ENST00000641404 1222 ntBASIC18.51■□□□□ 0.55
SLX4Q8IY92 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLX4Q8IY92 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLX4Q8IY92 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLX4Q8IY92 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLX4Q8IY92 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLX4Q8IY92 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLX4Q8IY92 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLX4Q8IY92 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLX4Q8IY92 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLX4Q8IY92 AC026803.1-201ENST00000569130 274 ntBASIC18.51■□□□□ 0.55
SLX4Q8IY92 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 AC242376.2-201ENST00000619355 883 ntBASIC18.51■□□□□ 0.55
SLX4Q8IY92 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLX4Q8IY92 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLX4Q8IY92 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.51■□□□□ 0.55
SLX4Q8IY92 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLX4Q8IY92 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLX4Q8IY92 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLX4Q8IY92 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLX4Q8IY92 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SLX4Q8IY92 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SLX4Q8IY92 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLX4Q8IY92 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLX4Q8IY92 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.5■□□□□ 0.55
SLX4Q8IY92 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms