Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 TARDBPP1-201ENST00000442013 1203 ntBASIC19.46■□□□□ 0.71
SKAP1Q86WV1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 AC010327.5-201ENST00000586923 3061 ntBASIC19.46■□□□□ 0.71
SKAP1Q86WV1 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SKAP1Q86WV1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 AL928921.2-201ENST00000641325 2442 ntBASIC19.45■□□□□ 0.7
SKAP1Q86WV1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 GPS2P2-201ENST00000430745 888 ntBASIC19.45■□□□□ 0.7
SKAP1Q86WV1 AL591424.1-201ENST00000442569 1213 ntBASIC19.45■□□□□ 0.7
SKAP1Q86WV1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 IGHV3-62-201ENST00000520057 340 ntBASIC19.45■□□□□ 0.7
SKAP1Q86WV1 AL133215.2-201ENST00000609242 977 ntBASIC19.45■□□□□ 0.7
SKAP1Q86WV1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SKAP1Q86WV1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 RN7SL589P-201ENST00000481268 310 ntBASIC19.44■□□□□ 0.7
SKAP1Q86WV1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 AC105021.1-202ENST00000570572 669 ntBASIC19.44■□□□□ 0.7
SKAP1Q86WV1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 AC022145.2-201ENST00000598203 171 ntBASIC19.44■□□□□ 0.7
SKAP1Q86WV1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 AC084121.4-201ENST00000641598 221 ntBASIC19.44■□□□□ 0.7
SKAP1Q86WV1 AF228730.8-201ENST00000642140 221 ntBASIC19.44■□□□□ 0.7
SKAP1Q86WV1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SKAP1Q86WV1 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms