Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD2Q7Z408 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD2Q7Z408 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD2Q7Z408 LYPLA2P1-203ENST00000447689 696 ntBASIC12.81□□□□□ -0.36
CSMD2Q7Z408 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.81□□□□□ -0.36
CSMD2Q7Z408 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CSMD2Q7Z408 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSMD2Q7Z408 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 AC006449.6-201ENST00000612330 2296 ntBASIC12.8□□□□□ -0.36
CSMD2Q7Z408 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 KRT8P21-201ENST00000430398 1491 ntBASIC12.8□□□□□ -0.36
CSMD2Q7Z408 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 AC090857.1-201ENST00000527400 390 ntBASIC12.8□□□□□ -0.36
CSMD2Q7Z408 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD2Q7Z408 MRPL37P1-201ENST00000592451 1337 ntBASIC12.79□□□□□ -0.36
CSMD2Q7Z408 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 AC011270.2-201ENST00000624293 2550 ntBASIC12.79□□□□□ -0.36
CSMD2Q7Z408 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.79□□□□□ -0.36
CSMD2Q7Z408 AC011840.2-201ENST00000563063 1520 ntBASIC12.79□□□□□ -0.36
CSMD2Q7Z408 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 AC024293.1-201ENST00000467930 498 ntBASIC12.79□□□□□ -0.36
CSMD2Q7Z408 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 AC090502.4-201ENST00000551714 1386 ntBASIC12.79□□□□□ -0.36
CSMD2Q7Z408 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 HLA-J-204ENST00000495278 958 ntBASIC12.79□□□□□ -0.36
CSMD2Q7Z408 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 AC004466.1-201ENST00000599515 1080 ntBASIC12.79□□□□□ -0.36
CSMD2Q7Z408 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CSMD2Q7Z408 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms