Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 KLF2P3-201ENST00000451977 1087 ntBASIC17.56■□□□□ 0.4
SHC4Q6S5L8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 AC125807.1-201ENST00000483097 614 ntBASIC17.56■□□□□ 0.4
SHC4Q6S5L8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 AC015911.4-201ENST00000588022 1070 ntBASIC17.56■□□□□ 0.4
SHC4Q6S5L8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHC4Q6S5L8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 AC044860.1-202ENST00000559481 777 ntBASIC17.55■□□□□ 0.4
SHC4Q6S5L8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.55■□□□□ 0.4
SHC4Q6S5L8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.55■□□□□ 0.4
SHC4Q6S5L8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 CICP14-201ENST00000629111 2732 ntBASIC17.54■□□□□ 0.4
SHC4Q6S5L8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 MIR1233-2-201ENST00000408138 82 ntBASIC17.54■□□□□ 0.4
SHC4Q6S5L8 MIR1233-1-201ENST00000408722 82 ntBASIC17.54■□□□□ 0.4
SHC4Q6S5L8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 AC027369.6-201ENST00000525520 931 ntBASIC17.54■□□□□ 0.4
SHC4Q6S5L8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHC4Q6S5L8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms