Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 AC023024.2-201ENST00000623561 1993 ntBASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 AC236430.1-201ENST00000402231 743 ntBASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 RARRES2P5-201ENST00000564013 466 ntBASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 LINC02560-201ENST00000596379 459 ntBASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
DENND1BQ6P3S1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 RPL5P21-201ENST00000404620 815 ntBASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 AC009118.2-201ENST00000613275 655 ntBASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DENND1BQ6P3S1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 AC126365.1-201ENST00000578585 1514 ntBASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 AC023157.3-201ENST00000619086 2088 ntBASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 AC002472.2-201ENST00000442739 958 ntBASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 MIR4745-201ENST00000577608 62 ntBASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 MIR8072-201ENST00000614241 80 ntBASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
DENND1BQ6P3S1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms