Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL54Q6P161 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL54Q6P161 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL54Q6P161 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL54Q6P161 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
MRPL54Q6P161 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
MRPL54Q6P161 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.85□□□□□ -0.51
MRPL54Q6P161 DGCR9-201ENST00000609630 2415 ntBASIC11.85□□□□□ -0.51
MRPL54Q6P161 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL54Q6P161 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 RCN1P2-201ENST00000398357 915 ntBASIC11.84□□□□□ -0.51
MRPL54Q6P161 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 SPDYE13P-201ENST00000445314 798 ntBASIC11.84□□□□□ -0.51
MRPL54Q6P161 AC245100.5-201ENST00000452108 331 ntBASIC11.84□□□□□ -0.51
MRPL54Q6P161 MINOS1P3-201ENST00000457048 203 ntBASIC11.84□□□□□ -0.51
MRPL54Q6P161 AC010203.1-204ENST00000548782 407 ntBASIC11.84□□□□□ -0.51
MRPL54Q6P161 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 CLN6-204ENST00000564752 900 ntTSL 3 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 MIR193BHG-211ENST00000641433 5365 ntBASIC11.84□□□□□ -0.51
MRPL54Q6P161 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 AC089987.1-201ENST00000551654 2209 ntBASIC11.84□□□□□ -0.51
MRPL54Q6P161 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
MRPL54Q6P161 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL54Q6P161 AC092135.3-201ENST00000624151 1846 ntBASIC11.83□□□□□ -0.51
MRPL54Q6P161 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
MRPL54Q6P161 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
MRPL54Q6P161 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 PI4KAP1-204ENST00000612579 1703 ntBASIC11.83□□□□□ -0.52
MRPL54Q6P161 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 MTHFR-210ENST00000641407 2387 ntBASIC11.83□□□□□ -0.52
MRPL54Q6P161 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 AC099521.3-201ENST00000624251 2938 ntBASIC11.83□□□□□ -0.52
MRPL54Q6P161 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 HOMER2P1-201ENST00000455653 964 ntBASIC11.83□□□□□ -0.52
MRPL54Q6P161 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 DUT-205ENST00000558813 769 ntTSL 2 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 AC005412.3-201ENST00000580309 715 ntBASIC11.83□□□□□ -0.52
MRPL54Q6P161 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms