Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 TMEM198B-204ENST00000484016 896 ntBASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 AC005740.2-201ENST00000511085 419 ntBASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 AP001002.3-201ENST00000623482 206 ntBASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 MAGEA5-201ENST00000446757 942 ntBASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 HIST2H2BB-201ENST00000449108 381 ntBASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 AC021723.1-201ENST00000486306 515 ntBASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 AC022616.1-201ENST00000518688 554 ntBASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 AC005730.2-201ENST00000564549 1184 ntBASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 MIR4706-201ENST00000582134 82 ntBASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD4Q5XG99 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 EIF3FP3-201ENST00000434851 1086 ntBASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 AL391280.1-201ENST00000506969 1062 ntBASIC15.12■□□□□ 0.01
LYSMD4Q5XG99 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms