Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 AC009477.1-201ENST00000452936 217 ntBASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 AC044860.1-202ENST00000559481 777 ntBASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 AC104794.3-201ENST00000566840 1248 ntBASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HERC4Q5GLZ8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 LINC00554-201ENST00000564841 3011 ntBASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 AP006294.1-201ENST00000415407 339 ntBASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 AC112492.5-201ENST00000421897 457 ntBASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 KRT17P8-201ENST00000540749 863 ntBASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 AC074044.1-201ENST00000609673 707 ntBASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.43■□□□□ 0.38
HERC4Q5GLZ8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms