Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 AC092933.1-201ENST00000393644 945 ntBASIC21.35■■□□□ 1.01
CDCA8Q53HL2 AC234783.1-201ENST00000441761 496 ntBASIC21.35■■□□□ 1.01
CDCA8Q53HL2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA8Q53HL2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 ZBTB45P1-201ENST00000452761 1456 ntBASIC21.34■■□□□ 1.01
CDCA8Q53HL2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 ACTBP8-201ENST00000403258 1108 ntBASIC21.34■■□□□ 1.01
CDCA8Q53HL2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 AL512343.1-201ENST00000605837 169 ntBASIC21.34■■□□□ 1.01
CDCA8Q53HL2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 MSTO2P-201ENST00000314835 1709 ntBASIC21.34■■□□□ 1.01
CDCA8Q53HL2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDCA8Q53HL2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 AL158070.2-201ENST00000623713 1621 ntBASIC21.33■■□□□ 1.01
CDCA8Q53HL2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC21.33■■□□□ 1.01
CDCA8Q53HL2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 AL139094.1-201ENST00000405549 1188 ntBASIC21.33■■□□□ 1.01
CDCA8Q53HL2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 KLF2P2-201ENST00000416807 1039 ntBASIC21.33■■□□□ 1.01
CDCA8Q53HL2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms