Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 MKNK2P1-201ENST00000437526 628 ntBASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
ATP6AP1LQ52LC2 LINC00528-201ENST00000600723 2160 ntBASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP6AP1LQ52LC2 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 ZBED1P1-201ENST00000502364 1930 ntBASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 AC004832.2-201ENST00000426397 482 ntBASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP6AP1LQ52LC2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms