Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 PTP4A1P2-201ENST00000546033 454 ntBASIC18.68■□□□□ 0.58
RFX7Q2KHR2 KRT90P-201ENST00000549264 1064 ntBASIC18.68■□□□□ 0.58
RFX7Q2KHR2 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.68■□□□□ 0.58
RFX7Q2KHR2 MIR6799-201ENST00000620297 69 ntBASIC18.68■□□□□ 0.58
RFX7Q2KHR2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 REXO1L6P-201ENST00000603433 1515 ntBASIC18.67■□□□□ 0.58
RFX7Q2KHR2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 BCRP2-202ENST00000447763 634 ntBASIC18.67■□□□□ 0.58
RFX7Q2KHR2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 BCRP6-201ENST00000510112 632 ntBASIC18.67■□□□□ 0.58
RFX7Q2KHR2 BCRP7-201ENST00000511549 544 ntBASIC18.67■□□□□ 0.58
RFX7Q2KHR2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 SAMD11P1-201ENST00000571429 661 ntBASIC18.67■□□□□ 0.58
RFX7Q2KHR2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFX7Q2KHR2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 REXO1L4P-201ENST00000605109 1937 ntBASIC18.66■□□□□ 0.58
RFX7Q2KHR2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms