Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.12□□□□□ -0.15
FOXF1Q12946 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXF1Q12946 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXF1Q12946 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.12□□□□□ -0.15
FOXF1Q12946 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXF1Q12946 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXF1Q12946 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
FOXF1Q12946 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXF1Q12946 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXF1Q12946 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
FOXF1Q12946 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.12□□□□□ -0.15
FOXF1Q12946 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXF1Q12946 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXF1Q12946 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXF1Q12946 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXF1Q12946 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXF1Q12946 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
FOXF1Q12946 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXF1Q12946 C18orf15-201ENST00000623680 2534 ntBASIC14.12□□□□□ -0.15
FOXF1Q12946 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.12□□□□□ -0.15
FOXF1Q12946 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXF1Q12946 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
FOXF1Q12946 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXF1Q12946 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXF1Q12946 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXF1Q12946 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXF1Q12946 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 SLC7A15P-201ENST00000424028 1363 ntBASIC14.11□□□□□ -0.15
FOXF1Q12946 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
FOXF1Q12946 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXF1Q12946 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXF1Q12946 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXF1Q12946 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXF1Q12946 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXF1Q12946 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXF1Q12946 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXF1Q12946 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FOXF1Q12946 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXF1Q12946 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FOXF1Q12946 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
FOXF1Q12946 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXF1Q12946 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXF1Q12946 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 AC092384.3-202ENST00000564646 2873 ntBASIC14.11□□□□□ -0.15
FOXF1Q12946 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
FOXF1Q12946 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 AC112693.3-201ENST00000624819 1983 ntBASIC14.11□□□□□ -0.15
FOXF1Q12946 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXF1Q12946 TSPY26P-202ENST00000565928 3884 ntBASIC14.11□□□□□ -0.15
FOXF1Q12946 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
FOXF1Q12946 AC063926.3-201ENST00000624734 5658 ntBASIC14.1□□□□□ -0.15
FOXF1Q12946 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXF1Q12946 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXF1Q12946 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXF1Q12946 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
FOXF1Q12946 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXF1Q12946 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXF1Q12946 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXF1Q12946 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXF1Q12946 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXF1Q12946 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXF1Q12946 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXF1Q12946 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
FOXF1Q12946 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXF1Q12946 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXF1Q12946 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXF1Q12946 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXF1Q12946 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXF1Q12946 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
FOXF1Q12946 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
FOXF1Q12946 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXF1Q12946 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXF1Q12946 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXF1Q12946 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXF1Q12946 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXF1Q12946 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXF1Q12946 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXF1Q12946 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXF1Q12946 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms