Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
CHRNB3Q05901 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB3Q05901 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB3Q05901 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB3Q05901 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB3Q05901 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB3Q05901 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB3Q05901 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB3Q05901 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
CHRNB3Q05901 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB3Q05901 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRNB3Q05901 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB3Q05901 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CHRNB3Q05901 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CHRNB3Q05901 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB3Q05901 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB3Q05901 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB3Q05901 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNB3Q05901 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 REXO1L1P-202ENST00000608646 1974 ntBASIC14.84□□□□□ -0.03
CHRNB3Q05901 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 PGAM5P1-201ENST00000518923 814 ntBASIC14.84□□□□□ -0.03
CHRNB3Q05901 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRNB3Q05901 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNB3Q05901 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CHRNB3Q05901 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.83□□□□□ -0.03
CHRNB3Q05901 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
CHRNB3Q05901 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.83□□□□□ -0.03
CHRNB3Q05901 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CHRNB3Q05901 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNB3Q05901 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNB3Q05901 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNB3Q05901 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNB3Q05901 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNB3Q05901 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNB3Q05901 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 AC092474.2-201ENST00000424288 719 ntBASIC14.83□□□□□ -0.04
CHRNB3Q05901 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 PRSS29P-201ENST00000440800 595 ntBASIC14.83□□□□□ -0.04
CHRNB3Q05901 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 MIR4751-201ENST00000578027 74 ntBASIC14.83□□□□□ -0.04
CHRNB3Q05901 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNB3Q05901 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNB3Q05901 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNB3Q05901 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNB3Q05901 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNB3Q05901 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNB3Q05901 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms