Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 AC138749.3-201ENST00000567691 622 ntBASIC16.61■□□□□ 0.25
GCNT1Q02742 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.61■□□□□ 0.25
GCNT1Q02742 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.61■□□□□ 0.25
GCNT1Q02742 AC116165.1-201ENST00000611806 668 ntBASIC16.61■□□□□ 0.25
GCNT1Q02742 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
GCNT1Q02742 AC009118.2-201ENST00000613275 655 ntBASIC16.61■□□□□ 0.25
GCNT1Q02742 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.61■□□□□ 0.25
GCNT1Q02742 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.61■□□□□ 0.25
GCNT1Q02742 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 AJ011932.1-201ENST00000621707 465 ntBASIC16.61■□□□□ 0.25
GCNT1Q02742 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.61■□□□□ 0.25
GCNT1Q02742 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
GCNT1Q02742 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.61■□□□□ 0.25
GCNT1Q02742 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.61■□□□□ 0.25
GCNT1Q02742 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GCNT1Q02742 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
GCNT1Q02742 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
GCNT1Q02742 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.61■□□□□ 0.25
GCNT1Q02742 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.6■□□□□ 0.25
GCNT1Q02742 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.6■□□□□ 0.25
GCNT1Q02742 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.6■□□□□ 0.25
GCNT1Q02742 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.6■□□□□ 0.25
GCNT1Q02742 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.6■□□□□ 0.25
GCNT1Q02742 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
GCNT1Q02742 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
GCNT1Q02742 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
GCNT1Q02742 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.6■□□□□ 0.25
GCNT1Q02742 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.6■□□□□ 0.25
GCNT1Q02742 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.6■□□□□ 0.25
GCNT1Q02742 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
GCNT1Q02742 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.6■□□□□ 0.25
GCNT1Q02742 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.6■□□□□ 0.25
GCNT1Q02742 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.6■□□□□ 0.25
GCNT1Q02742 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GCNT1Q02742 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.6■□□□□ 0.25
GCNT1Q02742 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GCNT1Q02742 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
GCNT1Q02742 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.59■□□□□ 0.25
GCNT1Q02742 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
GCNT1Q02742 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
GCNT1Q02742 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 AL596257.1-201ENST00000641463 2694 ntBASIC16.59■□□□□ 0.25
GCNT1Q02742 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 SPDYE19P-201ENST00000338590 713 ntBASIC16.59■□□□□ 0.25
GCNT1Q02742 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GCNT1Q02742 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GCNT1Q02742 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GCNT1Q02742 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.59■□□□□ 0.25
GCNT1Q02742 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.59■□□□□ 0.25
GCNT1Q02742 SPTLC1P1-201ENST00000447199 261 ntBASIC16.59■□□□□ 0.25
GCNT1Q02742 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.59■□□□□ 0.25
GCNT1Q02742 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.59■□□□□ 0.25
GCNT1Q02742 AC093004.1-201ENST00000508850 424 ntBASIC16.59■□□□□ 0.25
GCNT1Q02742 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.59■□□□□ 0.25
GCNT1Q02742 AC099568.2-201ENST00000609194 695 ntBASIC16.59■□□□□ 0.25
GCNT1Q02742 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.59■□□□□ 0.25
GCNT1Q02742 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GCNT1Q02742 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.59■□□□□ 0.25
GCNT1Q02742 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GCNT1Q02742 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.59■□□□□ 0.25
GCNT1Q02742 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
GCNT1Q02742 AC103702.1-201ENST00000548801 2630 ntBASIC16.59■□□□□ 0.25
GCNT1Q02742 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
GCNT1Q02742 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
GCNT1Q02742 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GCNT1Q02742 ZBED1P1-201ENST00000502364 1930 ntBASIC16.58■□□□□ 0.25
GCNT1Q02742 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms