Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.33■□□□□ 0.2
CBX1P83916 AC020765.3-201ENST00000613051 740 ntBASIC16.33■□□□□ 0.2
CBX1P83916 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CBX1P83916 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CBX1P83916 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX1P83916 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.33■□□□□ 0.2
CBX1P83916 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.33■□□□□ 0.2
CBX1P83916 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX1P83916 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.33■□□□□ 0.2
CBX1P83916 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.33■□□□□ 0.2
CBX1P83916 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CBX1P83916 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CBX1P83916 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX1P83916 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX1P83916 FTO-214ENST00000636218 2227 ntTSL 5 BASIC16.33■□□□□ 0.2
CBX1P83916 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBX1P83916 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CBX1P83916 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CBX1P83916 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CBX1P83916 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC16.32■□□□□ 0.2
CBX1P83916 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 KLF4P1-201ENST00000412782 1185 ntBASIC16.32■□□□□ 0.2
CBX1P83916 NUS1P1-201ENST00000446295 882 ntBASIC16.32■□□□□ 0.2
CBX1P83916 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.32■□□□□ 0.2
CBX1P83916 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC16.32■□□□□ 0.2
CBX1P83916 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CBX1P83916 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CBX1P83916 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.32■□□□□ 0.2
CBX1P83916 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.32■□□□□ 0.2
CBX1P83916 MPDU1-223ENST00000582151 728 ntBASIC16.32■□□□□ 0.2
CBX1P83916 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
CBX1P83916 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.32■□□□□ 0.2
CBX1P83916 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.32■□□□□ 0.2
CBX1P83916 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC16.32■□□□□ 0.2
CBX1P83916 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
CBX1P83916 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CBX1P83916 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CBX1P83916 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
CBX1P83916 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CBX1P83916 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.31■□□□□ 0.2
CBX1P83916 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC16.31■□□□□ 0.2
CBX1P83916 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CBX1P83916 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.31■□□□□ 0.2
CBX1P83916 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CBX1P83916 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CBX1P83916 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CBX1P83916 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CBX1P83916 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.31■□□□□ 0.2
CBX1P83916 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.31■□□□□ 0.2
CBX1P83916 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 AC007663.1-201ENST00000438948 1240 ntBASIC16.31■□□□□ 0.2
CBX1P83916 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.31■□□□□ 0.2
CBX1P83916 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.31■□□□□ 0.2
CBX1P83916 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.31■□□□□ 0.2
CBX1P83916 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.31■□□□□ 0.2
CBX1P83916 AL359736.2-201ENST00000621992 437 ntBASIC16.31■□□□□ 0.2
CBX1P83916 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.31■□□□□ 0.2
CBX1P83916 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CBX1P83916 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC16.31■□□□□ 0.2
CBX1P83916 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 U82695.1-201ENST00000635752 1889 ntBASIC16.31■□□□□ 0.2
CBX1P83916 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CBX1P83916 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CBX1P83916 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms