Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 NDUFV2P1-201ENST00000596415 907 ntBASIC17.58■□□□□ 0.4
CCNA1P78396 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.58■□□□□ 0.4
CCNA1P78396 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.58■□□□□ 0.4
CCNA1P78396 AL603764.1-201ENST00000636452 321 ntBASIC17.58■□□□□ 0.4
CCNA1P78396 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.58■□□□□ 0.4
CCNA1P78396 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCNA1P78396 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
CCNA1P78396 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.58■□□□□ 0.4
CCNA1P78396 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCNA1P78396 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCNA1P78396 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCNA1P78396 AL158070.2-201ENST00000623713 1621 ntBASIC17.58■□□□□ 0.4
CCNA1P78396 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.57■□□□□ 0.4
CCNA1P78396 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCNA1P78396 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCNA1P78396 AC018735.1-201ENST00000437208 1502 ntBASIC17.57■□□□□ 0.4
CCNA1P78396 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.57■□□□□ 0.4
CCNA1P78396 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCNA1P78396 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CCNA1P78396 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCNA1P78396 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCNA1P78396 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
CCNA1P78396 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCNA1P78396 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCNA1P78396 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCNA1P78396 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.57■□□□□ 0.4
CCNA1P78396 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.57■□□□□ 0.4
CCNA1P78396 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCNA1P78396 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.57■□□□□ 0.4
CCNA1P78396 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.57■□□□□ 0.4
CCNA1P78396 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.57■□□□□ 0.4
CCNA1P78396 HIST2H2BC-201ENST00000498492 580 ntBASIC17.57■□□□□ 0.4
CCNA1P78396 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCNA1P78396 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCNA1P78396 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.57■□□□□ 0.4
CCNA1P78396 AC007663.3-201ENST00000609632 465 ntBASIC17.57■□□□□ 0.4
CCNA1P78396 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCNA1P78396 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCNA1P78396 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCNA1P78396 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCNA1P78396 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCNA1P78396 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCNA1P78396 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCNA1P78396 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCNA1P78396 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCNA1P78396 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.56■□□□□ 0.4
CCNA1P78396 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.56■□□□□ 0.4
CCNA1P78396 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.56■□□□□ 0.4
CCNA1P78396 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.56■□□□□ 0.4
CCNA1P78396 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCNA1P78396 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.56■□□□□ 0.4
CCNA1P78396 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.56■□□□□ 0.4
CCNA1P78396 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.56■□□□□ 0.4
CCNA1P78396 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.56■□□□□ 0.4
CCNA1P78396 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.56■□□□□ 0.4
CCNA1P78396 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.56■□□□□ 0.4
CCNA1P78396 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.56■□□□□ 0.4
CCNA1P78396 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.56■□□□□ 0.4
CCNA1P78396 RN7SL713P-201ENST00000582127 302 ntBASIC17.56■□□□□ 0.4
CCNA1P78396 PPY2P-201ENST00000582808 702 ntBASIC17.56■□□□□ 0.4
CCNA1P78396 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.56■□□□□ 0.4
CCNA1P78396 AL451050.2-201ENST00000606967 682 ntBASIC17.56■□□□□ 0.4
CCNA1P78396 ZACNP1-201ENST00000612259 710 ntBASIC17.56■□□□□ 0.4
CCNA1P78396 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.56■□□□□ 0.4
CCNA1P78396 AL645728.2-202ENST00000641679 227 ntBASIC17.56■□□□□ 0.4
CCNA1P78396 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.56■□□□□ 0.4
CCNA1P78396 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CCNA1P78396 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCNA1P78396 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.56■□□□□ 0.4
CCNA1P78396 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCNA1P78396 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCNA1P78396 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCNA1P78396 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCNA1P78396 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms