Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLDN20P56880 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.35□□□□□ -0.11
CLDN20P56880 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 AC002472.2-201ENST00000442739 958 ntBASIC14.35□□□□□ -0.11
CLDN20P56880 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.35□□□□□ -0.11
CLDN20P56880 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 ZNF890P-202ENST00000530367 1156 ntBASIC14.35□□□□□ -0.11
CLDN20P56880 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLDN20P56880 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN20P56880 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN20P56880 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.35□□□□□ -0.11
CLDN20P56880 MIR3197-201ENST00000582241 73 ntBASIC14.35□□□□□ -0.11
CLDN20P56880 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.35□□□□□ -0.11
CLDN20P56880 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLDN20P56880 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLDN20P56880 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CLDN20P56880 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN20P56880 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN20P56880 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN20P56880 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN20P56880 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLDN20P56880 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN20P56880 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN20P56880 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN20P56880 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN20P56880 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN20P56880 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CLDN20P56880 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLDN20P56880 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.34□□□□□ -0.11
CLDN20P56880 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDN20P56880 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLDN20P56880 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLDN20P56880 SERBP1P5-201ENST00000510079 1181 ntBASIC14.34□□□□□ -0.11
CLDN20P56880 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN20P56880 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN20P56880 AC135586.1-201ENST00000539323 574 ntBASIC14.34□□□□□ -0.11
CLDN20P56880 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.34□□□□□ -0.11
CLDN20P56880 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDN20P56880 LINC02560-201ENST00000596379 459 ntBASIC14.34□□□□□ -0.11
CLDN20P56880 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDN20P56880 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDN20P56880 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN20P56880 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN20P56880 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
CLDN20P56880 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN20P56880 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN20P56880 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLDN20P56880 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN20P56880 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.34□□□□□ -0.11
CLDN20P56880 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN20P56880 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN20P56880 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN20P56880 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLDN20P56880 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN20P56880 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
CLDN20P56880 AC136621.1-201ENST00000624017 2304 ntBASIC14.33□□□□□ -0.11
CLDN20P56880 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CLDN20P56880 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN20P56880 LINC01101-201ENST00000622953 1884 ntBASIC14.33□□□□□ -0.11
CLDN20P56880 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN20P56880 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN20P56880 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
CLDN20P56880 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN20P56880 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CLDN20P56880 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN20P56880 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN20P56880 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN20P56880 AC068587.6-202ENST00000641839 5619 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms