Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRP9P49458 RPS8P6-201ENST00000426177 609 ntBASIC13.93□□□□□ -0.18
SRP9P49458 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.93□□□□□ -0.18
SRP9P49458 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SRP9P49458 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.93□□□□□ -0.18
SRP9P49458 AC093724.1-201ENST00000448659 1027 ntBASIC13.93□□□□□ -0.18
SRP9P49458 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.93□□□□□ -0.18
SRP9P49458 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.93□□□□□ -0.18
SRP9P49458 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.93□□□□□ -0.18
SRP9P49458 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.93□□□□□ -0.18
SRP9P49458 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SRP9P49458 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.93□□□□□ -0.18
SRP9P49458 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.93□□□□□ -0.18
SRP9P49458 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.93□□□□□ -0.18
SRP9P49458 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.93□□□□□ -0.18
SRP9P49458 AC073389.1-201ENST00000595595 795 ntBASIC13.93□□□□□ -0.18
SRP9P49458 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.93□□□□□ -0.18
SRP9P49458 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.93□□□□□ -0.18
SRP9P49458 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.93□□□□□ -0.18
SRP9P49458 AC139530.3-201ENST00000620344 690 ntBASIC13.93□□□□□ -0.18
SRP9P49458 AC055717.3-201ENST00000622967 595 ntBASIC13.93□□□□□ -0.18
SRP9P49458 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SRP9P49458 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRP9P49458 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SRP9P49458 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.93□□□□□ -0.18
SRP9P49458 SBF1P1-201ENST00000444527 5631 ntBASIC13.93□□□□□ -0.18
SRP9P49458 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRP9P49458 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRP9P49458 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRP9P49458 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SRP9P49458 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRP9P49458 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SRP9P49458 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SRP9P49458 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SRP9P49458 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRP9P49458 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SRP9P49458 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRP9P49458 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SRP9P49458 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SRP9P49458 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.92□□□□□ -0.18
SRP9P49458 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.92□□□□□ -0.18
SRP9P49458 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SRP9P49458 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SRP9P49458 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
SRP9P49458 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.92□□□□□ -0.18
SRP9P49458 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.92□□□□□ -0.18
SRP9P49458 AC004461.1-201ENST00000412461 403 ntBASIC13.92□□□□□ -0.18
SRP9P49458 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.92□□□□□ -0.18
SRP9P49458 KRT18P32-201ENST00000424695 1287 ntBASIC13.92□□□□□ -0.18
SRP9P49458 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.92□□□□□ -0.18
SRP9P49458 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.92□□□□□ -0.18
SRP9P49458 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.92□□□□□ -0.18
SRP9P49458 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.92□□□□□ -0.18
SRP9P49458 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.92□□□□□ -0.18
SRP9P49458 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.92□□□□□ -0.18
SRP9P49458 AL596442.2-201ENST00000610240 980 ntBASIC13.92□□□□□ -0.18
SRP9P49458 GPALPP1-207ENST00000611650 899 ntBASIC13.92□□□□□ -0.18
SRP9P49458 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
SRP9P49458 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SRP9P49458 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.92□□□□□ -0.18
SRP9P49458 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.92□□□□□ -0.18
SRP9P49458 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.92□□□□□ -0.18
SRP9P49458 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.92□□□□□ -0.18
SRP9P49458 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SRP9P49458 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SRP9P49458 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.92□□□□□ -0.18
SRP9P49458 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SRP9P49458 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SRP9P49458 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SRP9P49458 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.92□□□□□ -0.18
SRP9P49458 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SRP9P49458 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.92□□□□□ -0.18
SRP9P49458 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms