Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.7□□□□□ -0.06
GABRA4P48169 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
GABRA4P48169 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.7□□□□□ -0.06
GABRA4P48169 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
GABRA4P48169 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
GABRA4P48169 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
GABRA4P48169 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 AL008721.1-201ENST00000609964 604 ntBASIC14.7□□□□□ -0.06
GABRA4P48169 BX539320.1-201ENST00000623759 877 ntBASIC14.7□□□□□ -0.06
GABRA4P48169 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
GABRA4P48169 PRSS30P-206ENST00000641773 873 ntBASIC14.7□□□□□ -0.06
GABRA4P48169 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
GABRA4P48169 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.7□□□□□ -0.06
GABRA4P48169 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.7□□□□□ -0.06
GABRA4P48169 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.7□□□□□ -0.06
GABRA4P48169 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
GABRA4P48169 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.7□□□□□ -0.06
GABRA4P48169 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.69□□□□□ -0.06
GABRA4P48169 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.69□□□□□ -0.06
GABRA4P48169 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.69□□□□□ -0.06
GABRA4P48169 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GABRA4P48169 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRA4P48169 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
GABRA4P48169 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRA4P48169 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GABRA4P48169 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRA4P48169 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.69□□□□□ -0.06
GABRA4P48169 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.69□□□□□ -0.06
GABRA4P48169 BOLA2P3-201ENST00000404566 256 ntBASIC14.69□□□□□ -0.06
GABRA4P48169 KRT43P-201ENST00000434019 910 ntBASIC14.69□□□□□ -0.06
GABRA4P48169 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
GABRA4P48169 AC234783.1-201ENST00000441761 496 ntBASIC14.69□□□□□ -0.06
GABRA4P48169 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.69□□□□□ -0.06
GABRA4P48169 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.69□□□□□ -0.06
GABRA4P48169 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.69□□□□□ -0.06
GABRA4P48169 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.69□□□□□ -0.06
GABRA4P48169 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.69□□□□□ -0.06
GABRA4P48169 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
GABRA4P48169 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRA4P48169 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.69□□□□□ -0.06
GABRA4P48169 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRA4P48169 PDIA3P1-201ENST00000471856 1510 ntBASIC14.69□□□□□ -0.06
GABRA4P48169 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRA4P48169 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRA4P48169 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRA4P48169 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.69□□□□□ -0.06
GABRA4P48169 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GABRA4P48169 AC007787.1-201ENST00000588095 1583 ntBASIC14.68□□□□□ -0.06
GABRA4P48169 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
GABRA4P48169 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.68□□□□□ -0.06
GABRA4P48169 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.68□□□□□ -0.06
GABRA4P48169 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
GABRA4P48169 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 AC020658.6-201ENST00000623564 1870 ntBASIC14.68□□□□□ -0.06
GABRA4P48169 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
GABRA4P48169 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.68□□□□□ -0.06
GABRA4P48169 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GABRA4P48169 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.68□□□□□ -0.06
GABRA4P48169 AL355864.2-201ENST00000447420 863 ntBASIC14.68□□□□□ -0.06
GABRA4P48169 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.68□□□□□ -0.06
GABRA4P48169 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.68□□□□□ -0.06
GABRA4P48169 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
GABRA4P48169 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.68□□□□□ -0.06
GABRA4P48169 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.68□□□□□ -0.06
GABRA4P48169 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.68□□□□□ -0.06
GABRA4P48169 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.68□□□□□ -0.06
GABRA4P48169 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.68□□□□□ -0.06
GABRA4P48169 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.68□□□□□ -0.06
GABRA4P48169 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GABRA4P48169 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
GABRA4P48169 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRA4P48169 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.68□□□□□ -0.06
GABRA4P48169 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms