Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CYMP-203ENST00000474680 1263 ntBASIC15.01□□□□□ -0.01
SLC6A12P48065 AC093214.1-201ENST00000511688 1107 ntBASIC15.01□□□□□ -0.01
SLC6A12P48065 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC6A12P48065 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC6A12P48065 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 AC104794.3-201ENST00000566840 1248 ntBASIC15.01□□□□□ -0.01
SLC6A12P48065 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC6A12P48065 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SLC6A12P48065 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC6A12P48065 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC6A12P48065 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SLC6A12P48065 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SLC6A12P48065 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC6A12P48065 CLK3P2-201ENST00000427566 1453 ntBASIC15.01□□□□□ -0.01
SLC6A12P48065 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC6A12P48065 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SLC6A12P48065 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15□□□□□ -0.01
SLC6A12P48065 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SLC6A12P48065 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15□□□□□ -0.01
SLC6A12P48065 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SLC6A12P48065 AL512638.1-201ENST00000457493 794 ntBASIC15□□□□□ -0.01
SLC6A12P48065 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15□□□□□ -0.01
SLC6A12P48065 GAPDHP40-201ENST00000505218 1006 ntBASIC15□□□□□ -0.01
SLC6A12P48065 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15□□□□□ -0.01
SLC6A12P48065 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15□□□□□ -0.01
SLC6A12P48065 AP000845.1-201ENST00000581677 2131 ntBASIC15□□□□□ -0.01
SLC6A12P48065 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15□□□□□ -0.01
SLC6A12P48065 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SLC6A12P48065 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15□□□□□ -0.01
SLC6A12P48065 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15□□□□□ -0.01
SLC6A12P48065 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15□□□□□ -0.01
SLC6A12P48065 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15□□□□□ -0.01
SLC6A12P48065 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15□□□□□ -0.01
SLC6A12P48065 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15□□□□□ -0.01
SLC6A12P48065 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC6A12P48065 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SLC6A12P48065 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SLC6A12P48065 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SLC6A12P48065 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC6A12P48065 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC6A12P48065 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC6A12P48065 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SLC6A12P48065 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SLC6A12P48065 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.99□□□□□ -0.01
SLC6A12P48065 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC6A12P48065 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.99□□□□□ -0.01
SLC6A12P48065 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.99□□□□□ -0.01
SLC6A12P48065 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.99□□□□□ -0.01
SLC6A12P48065 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms