Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.09■□□□□ 0.33
USP8P40818 MIR4313-201ENST00000580760 101 ntBASIC17.09■□□□□ 0.33
USP8P40818 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.09■□□□□ 0.33
USP8P40818 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.09■□□□□ 0.33
USP8P40818 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 AC027612.4-201ENST00000605371 583 ntBASIC17.09■□□□□ 0.33
USP8P40818 AL691403.2-201ENST00000618460 490 ntBASIC17.09■□□□□ 0.33
USP8P40818 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.09■□□□□ 0.33
USP8P40818 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.09■□□□□ 0.33
USP8P40818 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.09■□□□□ 0.33
USP8P40818 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
USP8P40818 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.09■□□□□ 0.33
USP8P40818 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.09■□□□□ 0.33
USP8P40818 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.09■□□□□ 0.33
USP8P40818 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP8P40818 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP8P40818 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP8P40818 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP8P40818 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
USP8P40818 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
USP8P40818 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.08■□□□□ 0.33
USP8P40818 SSR4P1-203ENST00000599569 2260 ntBASIC17.08■□□□□ 0.33
USP8P40818 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
USP8P40818 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.08■□□□□ 0.33
USP8P40818 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.08■□□□□ 0.33
USP8P40818 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.08■□□□□ 0.33
USP8P40818 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP8P40818 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.08■□□□□ 0.33
USP8P40818 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.08■□□□□ 0.32
USP8P40818 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.08■□□□□ 0.32
USP8P40818 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.08■□□□□ 0.32
USP8P40818 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.08■□□□□ 0.32
USP8P40818 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.08■□□□□ 0.32
USP8P40818 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.08■□□□□ 0.32
USP8P40818 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
USP8P40818 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
USP8P40818 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.08■□□□□ 0.32
USP8P40818 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
USP8P40818 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.08■□□□□ 0.32
USP8P40818 BANF1P1-201ENST00000553684 263 ntBASIC17.08■□□□□ 0.32
USP8P40818 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.08■□□□□ 0.32
USP8P40818 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.08■□□□□ 0.32
USP8P40818 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
USP8P40818 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.08■□□□□ 0.32
USP8P40818 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.08■□□□□ 0.32
USP8P40818 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.08■□□□□ 0.32
USP8P40818 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP8P40818 AC087481.3-201ENST00000602886 1894 ntBASIC17.07■□□□□ 0.32
USP8P40818 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 AC020658.6-201ENST00000623564 1870 ntBASIC17.07■□□□□ 0.32
USP8P40818 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.07■□□□□ 0.32
USP8P40818 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
USP8P40818 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.07■□□□□ 0.32
USP8P40818 PPT1-215ENST00000641471 2368 ntBASIC17.07■□□□□ 0.32
USP8P40818 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.07■□□□□ 0.32
USP8P40818 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.07■□□□□ 0.32
USP8P40818 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.07■□□□□ 0.32
USP8P40818 RN7SL828P-201ENST00000607615 303 ntBASIC17.07■□□□□ 0.32
USP8P40818 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 LINC00628-201ENST00000628516 1289 ntBASIC17.07■□□□□ 0.32
USP8P40818 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
USP8P40818 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.07■□□□□ 0.32
USP8P40818 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms