Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.15■□□□□ 0.18
SCNN1AP37088 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SCNN1AP37088 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.15■□□□□ 0.18
SCNN1AP37088 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SCNN1AP37088 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.14■□□□□ 0.17
SCNN1AP37088 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.14■□□□□ 0.17
SCNN1AP37088 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
SCNN1AP37088 AC007787.1-201ENST00000588095 1583 ntBASIC16.14■□□□□ 0.17
SCNN1AP37088 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SCNN1AP37088 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 REXO1L4P-201ENST00000605109 1937 ntBASIC16.14■□□□□ 0.17
SCNN1AP37088 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.14■□□□□ 0.17
SCNN1AP37088 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SCNN1AP37088 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 AC098850.1-201ENST00000419919 790 ntBASIC16.14■□□□□ 0.17
SCNN1AP37088 NUS1P3-201ENST00000423502 862 ntBASIC16.14■□□□□ 0.17
SCNN1AP37088 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.14■□□□□ 0.17
SCNN1AP37088 AC190387.1-201ENST00000551683 408 ntBASIC16.14■□□□□ 0.17
SCNN1AP37088 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SCNN1AP37088 TP53TG3HP-202ENST00000569755 579 ntBASIC16.14■□□□□ 0.17
SCNN1AP37088 SPDYE22P-201ENST00000582158 798 ntBASIC16.14■□□□□ 0.17
SCNN1AP37088 AC092364.2-202ENST00000597012 1073 ntBASIC16.14■□□□□ 0.17
SCNN1AP37088 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.14■□□□□ 0.17
SCNN1AP37088 AC007431.3-201ENST00000623221 587 ntBASIC16.14■□□□□ 0.17
SCNN1AP37088 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SCNN1AP37088 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SCNN1AP37088 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.14■□□□□ 0.17
SCNN1AP37088 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCNN1AP37088 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.13■□□□□ 0.17
SCNN1AP37088 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.13■□□□□ 0.17
SCNN1AP37088 KRT8P22-201ENST00000562317 1415 ntBASIC16.13■□□□□ 0.17
SCNN1AP37088 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.13■□□□□ 0.17
SCNN1AP37088 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.13■□□□□ 0.17
SCNN1AP37088 MYCLP2-201ENST00000449268 967 ntBASIC16.13■□□□□ 0.17
SCNN1AP37088 CRB3P1-201ENST00000449338 276 ntBASIC16.13■□□□□ 0.17
SCNN1AP37088 ELK1P1-201ENST00000485699 580 ntBASIC16.13■□□□□ 0.17
SCNN1AP37088 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.13■□□□□ 0.17
SCNN1AP37088 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.13■□□□□ 0.17
SCNN1AP37088 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.13■□□□□ 0.17
SCNN1AP37088 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.13■□□□□ 0.17
SCNN1AP37088 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.13■□□□□ 0.17
SCNN1AP37088 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.13■□□□□ 0.17
SCNN1AP37088 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.13■□□□□ 0.17
SCNN1AP37088 AL589935.2-201ENST00000616471 1231 ntBASIC16.13■□□□□ 0.17
SCNN1AP37088 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.13■□□□□ 0.17
SCNN1AP37088 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.13■□□□□ 0.17
SCNN1AP37088 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.13■□□□□ 0.17
SCNN1AP37088 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SCNN1AP37088 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.13■□□□□ 0.17
SCNN1AP37088 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 ZBED1P1-201ENST00000502364 1930 ntBASIC16.13■□□□□ 0.17
SCNN1AP37088 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.13■□□□□ 0.17
SCNN1AP37088 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCNN1AP37088 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms