Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LSP1P33241 CICP11-201ENST00000434745 2827 ntBASIC15.71■□□□□ 0.1
LSP1P33241 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.1
LSP1P33241 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LSP1P33241 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LSP1P33241 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LSP1P33241 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.7■□□□□ 0.1
LSP1P33241 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LSP1P33241 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LSP1P33241 KRT18P1-202ENST00000452408 1331 ntBASIC15.7■□□□□ 0.1
LSP1P33241 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.7■□□□□ 0.1
LSP1P33241 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LSP1P33241 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LSP1P33241 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LSP1P33241 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LSP1P33241 AL122018.1-201ENST00000446607 2310 ntBASIC15.7■□□□□ 0.1
LSP1P33241 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.7■□□□□ 0.1
LSP1P33241 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.7■□□□□ 0.1
LSP1P33241 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
LSP1P33241 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.7■□□□□ 0.1
LSP1P33241 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LSP1P33241 PMS2P4-201ENST00000412466 1052 ntBASIC15.7■□□□□ 0.1
LSP1P33241 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.7■□□□□ 0.1
LSP1P33241 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.7■□□□□ 0.1
LSP1P33241 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LSP1P33241 AL139288.1-201ENST00000623748 933 ntBASIC15.7■□□□□ 0.1
LSP1P33241 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.7■□□□□ 0.1
LSP1P33241 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.7■□□□□ 0.1
LSP1P33241 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LSP1P33241 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.7■□□□□ 0.1
LSP1P33241 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.7■□□□□ 0.1
LSP1P33241 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LSP1P33241 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LSP1P33241 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LSP1P33241 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.69■□□□□ 0.1
LSP1P33241 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.69■□□□□ 0.1
LSP1P33241 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.69■□□□□ 0.1
LSP1P33241 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
LSP1P33241 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.69■□□□□ 0.1
LSP1P33241 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LSP1P33241 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
LSP1P33241 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.69■□□□□ 0.1
LSP1P33241 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LSP1P33241 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
LSP1P33241 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 ELK2BP-201ENST00000415014 1224 ntBASIC15.69■□□□□ 0.1
LSP1P33241 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.69■□□□□ 0.1
LSP1P33241 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.69■□□□□ 0.1
LSP1P33241 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 TOB2P1-201ENST00000469761 992 ntBASIC15.69■□□□□ 0.1
LSP1P33241 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.69■□□□□ 0.1
LSP1P33241 TPSP2-201ENST00000561760 610 ntBASIC15.69■□□□□ 0.1
LSP1P33241 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.69■□□□□ 0.1
LSP1P33241 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LSP1P33241 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
LSP1P33241 AC006504.4-201ENST00000592118 1568 ntBASIC15.69■□□□□ 0.1
LSP1P33241 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
LSP1P33241 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.69■□□□□ 0.1
LSP1P33241 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LSP1P33241 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.69■□□□□ 0.1
LSP1P33241 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LSP1P33241 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LSP1P33241 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms