Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 AL390754.1-201ENST00000619088 582 ntBASIC16.49■□□□□ 0.23
CHRNA3P32297 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRNA3P32297 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CHRNA3P32297 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 AL035456.1-201ENST00000456064 1369 ntBASIC16.49■□□□□ 0.23
CHRNA3P32297 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
CHRNA3P32297 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CHRNA3P32297 AC148477.4-201ENST00000613430 1793 ntBASIC16.49■□□□□ 0.23
CHRNA3P32297 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRNA3P32297 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CHRNA3P32297 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRNA3P32297 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CHRNA3P32297 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRNA3P32297 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHRNA3P32297 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 AC092580.3-201ENST00000430932 139 ntBASIC16.48■□□□□ 0.23
CHRNA3P32297 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.48■□□□□ 0.23
CHRNA3P32297 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 INGX-202ENST00000489074 768 ntBASIC16.48■□□□□ 0.23
CHRNA3P32297 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.48■□□□□ 0.23
CHRNA3P32297 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNA3P32297 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNA3P32297 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.48■□□□□ 0.23
CHRNA3P32297 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRNA3P32297 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.48■□□□□ 0.23
CHRNA3P32297 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.48■□□□□ 0.23
CHRNA3P32297 AC073592.8-201ENST00000624126 511 ntBASIC16.48■□□□□ 0.23
CHRNA3P32297 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNA3P32297 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRNA3P32297 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHRNA3P32297 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHRNA3P32297 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHRNA3P32297 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHRNA3P32297 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CHRNA3P32297 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA3P32297 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRNA3P32297 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA3P32297 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.47■□□□□ 0.23
CHRNA3P32297 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHRNA3P32297 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CHRNA3P32297 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA3P32297 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA3P32297 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.47■□□□□ 0.23
CHRNA3P32297 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.47■□□□□ 0.23
CHRNA3P32297 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA3P32297 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHRNA3P32297 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CHRNA3P32297 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.47■□□□□ 0.23
CHRNA3P32297 AC027369.6-201ENST00000525520 931 ntBASIC16.47■□□□□ 0.23
CHRNA3P32297 AC105021.1-202ENST00000570572 669 ntBASIC16.47■□□□□ 0.23
CHRNA3P32297 MIR3197-201ENST00000582241 73 ntBASIC16.47■□□□□ 0.23
CHRNA3P32297 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA3P32297 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA3P32297 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA3P32297 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA3P32297 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA3P32297 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA3P32297 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA3P32297 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA3P32297 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms