Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 SAFB2-206ENST00000590262 564 ntTSL 48.9□□□□□ -0.986e-6■□□□□ 10.6
RPS3P23396 RPS23-203ENST00000504293 576 ntTSL 1 (best)8.47□□□□□ -1.054e-30■□□□□ 10.6
RPS3P23396 ARPP19-209ENST00000567669 745 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.066e-6■□□□□ 10.6
RPS3P23396 MMS19-215ENST00000478452 835 ntTSL 28.35□□□□□ -1.076e-6■□□□□ 10.6
RPS3P23396 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC8.27□□□□□ -1.096e-6■□□□□ 10.6
RPS3P23396 DLST-205ENST00000554806 837 ntTSL 1 (best)8.26□□□□□ -1.096e-6■□□□□ 10.6
RPS3P23396 DLST-207ENST00000555089 1078 ntTSL 1 (best)8.19□□□□□ -1.16e-6■□□□□ 10.6
RPS3P23396 DLST-211ENST00000555988 718 ntTSL 58.19□□□□□ -1.16e-6■□□□□ 10.6
RPS3P23396 TIMM50-207ENST00000596239 683 ntTSL 27.62□□□□□ -1.196e-6■□□□□ 10.6
RPS3P23396 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.23□□□□□ -1.256e-6■□□□□ 10.6
RPS3P23396 PTPA-221ENST00000440346 490 ntTSL 47□□□□□ -1.296e-6■□□□□ 10.6
RPS3P23396 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.566e-6■□□□□ 10.6
RPS3P23396 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5□□□□□ -1.616e-6■□□□□ 10.6
RPS3P23396 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.9□□□□□ -1.636e-6■□□□□ 10.6
RPS3P23396 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.686e-6■□□□□ 10.6
RPS3P23396 SORT1-202ENST00000466471 521 ntTSL 23.16□□□□□ -1.91e-12■□□□□ 10.6
RPS3P23396 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.81□□□□□ -1.966e-6■□□□□ 10.6
RPS3P23396 ARPP19-207ENST00000565288 242 ntTSL 31.34□□□□□ -2.196e-6■□□□□ 10.6
RPS3P23396 ARPP19-210ENST00000567830 275 ntTSL 30.58□□□□□ -2.326e-6■□□□□ 10.6
RPS3P23396 FCGRT-209ENST00000596147 383 ntTSL 317.17■□□□□ 0.344e-7■□□□□ 10.6
RPS3P23396 FCGRT-206ENST00000594823 819 ntTSL 514.6□□□□□ -0.074e-7■□□□□ 10.6
RPS3P23396 ANPEP-209ENST00000560137 638 ntTSL 314.2□□□□□ -0.145e-16■□□□□ 10.6
RPS3P23396 ANPEP-205ENST00000559874 663 ntTSL 38.73□□□□□ -1.015e-16■□□□□ 10.6
RPS3P23396 NAGPA-214ENST00000568528 543 nt18.04■□□□□ 0.483e-6■□□□□ 10.6
RPS3P23396 PTK7-209ENST00000470471 854 ntTSL 210.6□□□□□ -0.713e-6■□□□□ 10.6
RPS3P23396 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.44■□□□□ 0.227e-11■□□□□ 10.6
RPS3P23396 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.337e-11■□□□□ 10.6
RPS3P23396 RPL10-213ENST00000482732 1731 ntTSL 1 (best)11.12□□□□□ -0.636e-17■□□□□ 10.6
RPS3P23396 FCGRT-218ENST00000600273 582 ntTSL 216.59■□□□□ 0.252e-10■□□□□ 10.6
RPS3P23396 FCGRT-216ENST00000599701 579 ntTSL 215.27■□□□□ 0.042e-10■□□□□ 10.6
RPS3P23396 FCGRT-207ENST00000595677 714 ntTSL 514.11□□□□□ -0.152e-10■□□□□ 10.6
RPS3P23396 DAG1-202ENST00000418588 731 ntTSL 318.77■□□□□ 0.64e-7■□□□□ 10.6
RPS3P23396 DAG1-209ENST00000452060 588 ntTSL 218.77■□□□□ 0.64e-7■□□□□ 10.6
RPS3P23396 DAG1-210ENST00000452317 547 ntTSL 417.24■□□□□ 0.354e-7■□□□□ 10.6
RPS3P23396 DAG1-205ENST00000428779 841 ntTSL 316.97■□□□□ 0.314e-7■□□□□ 10.6
RPS3P23396 DAG1-208ENST00000435508 624 ntTSL 316.97■□□□□ 0.314e-7■□□□□ 10.6
RPS3P23396 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.025e-6■□□□□ 10.6
RPS3P23396 GSPT1-210ENST00000568849 790 ntTSL 313.55□□□□□ -0.248e-8■□□□□ 10.6
RPS3P23396 PTBP1-212ENST00000587136 583 ntTSL 320.56■□□□□ 0.883e-17■□□□□ 10.6
RPS3P23396 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.24■□□□□ 0.996e-7■□□□□ 10.6
RPS3P23396 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.89■□□□□ 0.936e-7■□□□□ 10.6
RPS3P23396 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.94■□□□□ 0.466e-7■□□□□ 10.6
RPS3P23396 NARF-203ENST00000374611 1722 ntTSL 516.42■□□□□ 0.226e-7■□□□□ 10.6
RPS3P23396 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.19■□□□□ 0.186e-7■□□□□ 10.6
RPS3P23396 NARF-201ENST00000309794 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.56e-7■□□□□ 10.6
RPS3P23396 NARF-225ENST00000584445 2484 ntTSL 211.59□□□□□ -0.556e-7■□□□□ 10.6
RPS3P23396 NARF-209ENST00000577812 2598 ntTSL 511.42□□□□□ -0.586e-7■□□□□ 10.6
RPS3P23396 NARF-211ENST00000578820 625 ntTSL 39.73□□□□□ -0.856e-7■□□□□ 10.6
RPS3P23396 NARF-222ENST00000583908 430 ntTSL 39.7□□□□□ -0.866e-7■□□□□ 10.6
RPS3P23396 NARF-227ENST00000584965 300 ntTSL 39.68□□□□□ -0.866e-7■□□□□ 10.6
RPS3P23396 SKP1-213ENST00000524288 732 ntTSL 1 (best)3.83□□□□□ -1.86e-15■□□□□ 10.6
RPS3P23396 SKP1-211ENST00000523359 748 ntTSL 53.33□□□□□ -1.886e-15■□□□□ 10.6
RPS3P23396 VRK1-207ENST00000557352 599 ntTSL 52.56□□□□□ -26e-15■□□□□ 10.6
RPS3P23396 HSP90AA1-208ENST00000557234 584 ntTSL 317.25■□□□□ 0.351e-6■□□□□ 10.6
RPS3P23396 ACTN1-220ENST00000556433 1259 ntTSL 321.7■■□□□ 1.063e-6■□□□□ 10.6
RPS3P23396 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.414e-6■□□□□ 10.6
RPS3P23396 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.264e-6■□□□□ 10.6
RPS3P23396 PLOD3-215ENST00000487563 712 ntTSL 222.7■■□□□ 1.224e-6■□□□□ 10.6
RPS3P23396 GNB1-207ENST00000472614 708 ntTSL 222.34■■□□□ 1.171e-21■□□□□ 10.6
RPS3P23396 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.32■■□□□ 1.164e-6■□□□□ 10.6
RPS3P23396 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.95■■□□□ 1.14e-6■□□□□ 10.6
RPS3P23396 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.034e-6■□□□□ 10.6
RPS3P23396 CERS5-218ENST00000549942 522 ntTSL 420.82■□□□□ 0.924e-6■□□□□ 10.6
RPS3P23396 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.43■□□□□ 0.864e-6■□□□□ 10.6
RPS3P23396 CERS5-222ENST00000550899 578 ntTSL 419.55■□□□□ 0.724e-6■□□□□ 10.6
RPS3P23396 SCAP-204ENST00000416847 683 ntTSL 319.01■□□□□ 0.639e-10■□□□□ 10.6
RPS3P23396 CERS5-207ENST00000546514 522 ntTSL 418.66■□□□□ 0.584e-6■□□□□ 10.6
RPS3P23396 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.534e-6■□□□□ 10.6
RPS3P23396 CERS5-210ENST00000547455 565 ntTSL 418.36■□□□□ 0.534e-6■□□□□ 10.6
RPS3P23396 SCAP-203ENST00000416208 1222 ntTSL 518.24■□□□□ 0.519e-10■□□□□ 10.6
RPS3P23396 CERS5-204ENST00000438450 945 ntTSL 217.98■□□□□ 0.474e-6■□□□□ 10.6
RPS3P23396 ISM2-203ENST00000471734 913 ntTSL 317.8■□□□□ 0.444e-6■□□□□ 10.6
RPS3P23396 PISD-213ENST00000474017 1760 ntTSL 517.68■□□□□ 0.424e-6■□□□□ 10.6
RPS3P23396 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.424e-6■□□□□ 10.6
RPS3P23396 ISM2-208ENST00000554801 579 ntTSL 417.36■□□□□ 0.374e-6■□□□□ 10.6
RPS3P23396 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.374e-6■□□□□ 10.6
RPS3P23396 TTYH3-202ENST00000400376 560 ntTSL 417.32■□□□□ 0.363e-8■□□□□ 10.6
RPS3P23396 PISD-214ENST00000478893 1056 ntTSL 217.2■□□□□ 0.344e-6■□□□□ 10.6
RPS3P23396 CERS5-217ENST00000549389 558 ntTSL 416.85■□□□□ 0.294e-6■□□□□ 10.6
RPS3P23396 CERS5-226ENST00000551697 2260 ntTSL 516.58■□□□□ 0.254e-6■□□□□ 10.6
RPS3P23396 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.34■□□□□ 0.214e-6■□□□□ 10.6
RPS3P23396 CERS5-212ENST00000547800 825 ntTSL 216.24■□□□□ 0.194e-6■□□□□ 10.6
RPS3P23396 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.22■□□□□ 0.194e-6■□□□□ 10.6
RPS3P23396 PISD-212ENST00000473770 2378 ntTSL 516.03■□□□□ 0.164e-6■□□□□ 10.6
RPS3P23396 CERS5-220ENST00000550258 579 ntTSL 416■□□□□ 0.154e-6■□□□□ 10.6
RPS3P23396 CERS5-213ENST00000547852 581 ntTSL 415.8■□□□□ 0.124e-6■□□□□ 10.6
RPS3P23396 CERS5-211ENST00000547787 2132 ntTSL 215.58■□□□□ 0.084e-6■□□□□ 10.6
RPS3P23396 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.034e-6■□□□□ 10.6
RPS3P23396 CDIPT-208ENST00000567459 434 ntTSL 315.09■□□□□ 0.014e-6■□□□□ 10.6
RPS3P23396 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.014e-6■□□□□ 10.6
RPS3P23396 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.044e-6■□□□□ 10.6
RPS3P23396 PLOD3-205ENST00000440925 536 ntTSL 414.68□□□□□ -0.064e-6■□□□□ 10.6
RPS3P23396 PISD-217ENST00000491342 692 ntTSL 514.52□□□□□ -0.094e-6■□□□□ 10.6
RPS3P23396 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.134e-6■□□□□ 10.6
RPS3P23396 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.14□□□□□ -0.154e-6■□□□□ 10.6
RPS3P23396 PLOD3-208ENST00000460132 578 ntTSL 314.14□□□□□ -0.154e-6■□□□□ 10.6
RPS3P23396 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.02□□□□□ -0.164e-6■□□□□ 10.6
RPS3P23396 PISD-211ENST00000460723 2534 ntTSL 1 (best)13.71□□□□□ -0.214e-6■□□□□ 10.6
RPS3P23396 SLC6A8-209ENST00000476466 470 ntTSL 313.64□□□□□ -0.234e-6■□□□□ 10.6
RPS3P23396 SCAP-205ENST00000420588 546 ntTSL 413.57□□□□□ -0.249e-10■□□□□ 10.6
Retrieved 100 of 24,271 protein–RNA pairs in 441.3 ms