RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 AEBP2Q6ZN18 517 aaPredicted RBP14.04□□□□□ -0.16
SORT1-202ENST00000466471 CHIC1Q5VXU3 224 aa13.25□□□□□ -0.29
SORT1-202ENST00000466471 SENP3Q9H4L4 574 aaPredicted RBP11.95□□□□□ -0.5
SORT1-202ENST00000466471 PHF23Q9BUL5 403 aaPredicted RBP11.82□□□□□ -0.52
SORT1-202ENST00000466471 FOXD1Q16676 465 aa11.18□□□□□ -0.62
SORT1-202ENST00000466471 PLPPR3Q6T4P5 718 aa10.55□□□□□ -0.72
SORT1-202ENST00000466471 MSH5O43196 834 aa10.44□□□□□ -0.74
SORT1-202ENST00000466471 PIAS4Q8N2W9 510 aaPredicted RBP10.43□□□□□ -0.74
SORT1-202ENST00000466471 PPP6R1Q9UPN7 881 aa10.43□□□□□ -0.74
SORT1-202ENST00000466471 ADRA2BP18089 450 aa10.41□□□□□ -0.74
SORT1-202ENST00000466471 POTEDQ86YR6 584 aa10.34□□□□□ -0.75
SORT1-202ENST00000466471 MAPK8IP2Q13387 824 aaPredicted RBP9.58□□□□□ -0.88
SORT1-202ENST00000466471 DMRT2Q9Y5R5 561 aa9.47□□□□□ -0.89
SORT1-202ENST00000466471 SCAF1Q9H7N4 1312 aaKnown RBP9.46□□□□□ -0.9
SORT1-202ENST00000466471 PPP4R3CPQ6ZMV5 832 aa9.26□□□□□ -0.93
SORT1-202ENST00000466471 DCAF8L1A6NGE4 600 aa9.16□□□□□ -0.94
SORT1-202ENST00000466471 HOXD11P31277 338 aaPredicted RBP9.09□□□□□ -0.95
SORT1-202ENST00000466471 CNKSR2Q8WXI2 1034 aa9.08□□□□□ -0.96
SORT1-202ENST00000466471 CACNB1Q02641 598 aaPredicted RBP9.05□□□□□ -0.96
SORT1-202ENST00000466471 RNF216Q9NWF9 866 aaPredicted RBP9□□□□□ -0.97
SORT1-202ENST00000466471 RNF39Q9H2S5 420 aa8.92□□□□□ -0.98
SORT1-202ENST00000466471 NCBP3Q53F19 620 aaKnown RBP8.87□□□□□ -0.99
SORT1-202ENST00000466471 C1QBPQ07021 282 aaKnown RBP8.77□□□□□ -1.01
SORT1-202ENST00000466471 NPM3O75607 178 aaKnown RBP8.75□□□□□ -1.01
SORT1-202ENST00000466471 DNAJC5BQ9UF47 199 aa8.73□□□□□ -1.01
SORT1-202ENST00000466471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.7□□□□□ -1.022e-6■□□□□ 9.8
SORT1-202ENST00000466471 KCNA4P22459 653 aa8.56□□□□□ -1.04
SORT1-202ENST00000466471 U3KPZ7 1027 aaPredicted RBP8.5□□□□□ -1.05
SORT1-202ENST00000466471 SPINK5Q9NQ38 1064 aaPredicted RBP8.42□□□□□ -1.06
SORT1-202ENST00000466471 CAPN15O75808 1086 aa8.41□□□□□ -1.06
SORT1-202ENST00000466471 SLC4A2P04920 1241 aa8.39□□□□□ -1.07
SORT1-202ENST00000466471 DSG3P32926 999 aa8.35□□□□□ -1.07
SORT1-202ENST00000466471 TRHP20396 242 aaPredicted RBP8.27□□□□□ -1.09
SORT1-202ENST00000466471 ABCB7O75027 752 aa8.22□□□□□ -1.09
SORT1-202ENST00000466471 APLP2Q06481 763 aa8.21□□□□□ -1.1
SORT1-202ENST00000466471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.19□□□□□ -1.1
SORT1-202ENST00000466471 HNRNPUL2Q1KMD3 747 aaKnown RBP8.19□□□□□ -1.1
SORT1-202ENST00000466471 ZNF219Q9P2Y4 722 aaPredicted RBP8.19□□□□□ -1.1
SORT1-202ENST00000466471 SAMD1Q6SPF0 538 aaPredicted RBP8.16□□□□□ -1.1
SORT1-202ENST00000466471 MYCNP04198 464 aaPredicted RBP8.08□□□□□ -1.12
SORT1-202ENST00000466471 POTEHQ6S545 545 aa8.08□□□□□ -1.12
SORT1-202ENST00000466471 SLC4A1APQ9BWU0 796 aaKnown RBP8.06□□□□□ -1.12
SORT1-202ENST00000466471 POLA2Q14181 598 aa8.02□□□□□ -1.13
SORT1-202ENST00000466471 FOXD4L1Q9NU39 408 aa7.97□□□□□ -1.13
SORT1-202ENST00000466471 ATF5Q9Y2D1 282 aaPredicted RBP7.95□□□□□ -1.14
SORT1-202ENST00000466471 RBM42Q9BTD8 480 aaKnown RBP7.93□□□□□ -1.14
SORT1-202ENST00000466471 EHMT2Q96KQ7 1210 aa7.91□□□□□ -1.14
SORT1-202ENST00000466471 ZBTB22O15209 634 aa7.87□□□□□ -1.15
SORT1-202ENST00000466471 ABCC9O60706 1549 aa7.87□□□□□ -1.15
SORT1-202ENST00000466471 CHRDL2Q6WN34 429 aa7.82□□□□□ -1.16
SORT1-202ENST00000466471 NISCHQ9Y2I1 1504 aa7.8□□□□□ -1.16
SORT1-202ENST00000466471 DNAJC5Q9H3Z4 198 aa7.8□□□□□ -1.16
SORT1-202ENST00000466471 ZBTB12Q9Y330 459 aaPredicted RBP7.79□□□□□ -1.16
SORT1-202ENST00000466471 OSCARQ8IYS5 282 aa7.76□□□□□ -1.17
SORT1-202ENST00000466471 AKT1S1Q96B36 256 aa7.75□□□□□ -1.17
SORT1-202ENST00000466471 ATXN8OSP0DMR3 200 aa7.71□□□□□ -1.18
SORT1-202ENST00000466471 REM2Q8IYK8 340 aaPredicted RBP7.71□□□□□ -1.18
SORT1-202ENST00000466471 CSRNP3Q8WYN3 585 aa7.67□□□□□ -1.18
SORT1-202ENST00000466471 PIP4P2Q8N4L2 257 aa7.63□□□□□ -1.19
SORT1-202ENST00000466471 PITPNM1O00562 1244 aa7.62□□□□□ -1.19
SORT1-202ENST00000466471 FBLN2P98095 1184 aa7.61□□□□□ -1.19
SORT1-202ENST00000466471 SPDYE2BA6NHP3 402 aa7.56□□□□□ -1.2
SORT1-202ENST00000466471 SPDYE6P0CI01 402 aa7.56□□□□□ -1.2
SORT1-202ENST00000466471 MKRN4PQ13434 485 aaPredicted RBP7.56□□□□□ -1.2
SORT1-202ENST00000466471 SPDYE2Q495Y8 402 aa7.56□□□□□ -1.2
SORT1-202ENST00000466471 FXR2P51116 673 aaKnown RBP eCLIP7.55□□□□□ -1.2
SORT1-202ENST00000466471 SP7Q8TDD2 431 aaPredicted RBP7.54□□□□□ -1.2
SORT1-202ENST00000466471 HAX1O00165 279 aa7.53□□□□□ -1.2
SORT1-202ENST00000466471 ZNF692Q9BU19 519 aaPredicted RBP7.5□□□□□ -1.21
SORT1-202ENST00000466471 CLEC11AQ9Y240 323 aa7.49□□□□□ -1.21
SORT1-202ENST00000466471 SPDYE1Q8NFV5 336 aaPredicted RBP7.46□□□□□ -1.22
SORT1-202ENST00000466471 SSUH2Q9Y2M2 353 aa7.45□□□□□ -1.22
SORT1-202ENST00000466471 EVX2Q03828 476 aa7.44□□□□□ -1.22
SORT1-202ENST00000466471 PRKAR2AP13861 404 aaKnown RBP7.43□□□□□ -1.22
SORT1-202ENST00000466471 CCDC180Q9P1Z9 1646 aa7.41□□□□□ -1.22
SORT1-202ENST00000466471 PABPN1Q86U42 306 aaKnown RBP eCLIP7.39□□□□□ -1.23
SORT1-202ENST00000466471 CHADLQ6NUI6 762 aa7.36□□□□□ -1.23
SORT1-202ENST00000466471 SLC24A1O60721 1099 aa7.35□□□□□ -1.23
SORT1-202ENST00000466471 PRR29P0C7W0 189 aa7.34□□□□□ -1.23
SORT1-202ENST00000466471 C19orf67A6NJJ6 358 aa7.31□□□□□ -1.24
SORT1-202ENST00000466471 AMER1Q5JTC6 1135 aaPredicted RBP7.3□□□□□ -1.24
SORT1-202ENST00000466471 RB1CC1Q8TDY2 1594 aa7.29□□□□□ -1.24
SORT1-202ENST00000466471 GABBR2O75899 941 aa7.24□□□□□ -1.25
SORT1-202ENST00000466471 FARP1Q9Y4F1 1045 aaPredicted RBP7.21□□□□□ -1.26
SORT1-202ENST00000466471 UNC13AQ9UPW8 1703 aa7.2□□□□□ -1.26
SORT1-202ENST00000466471 CECR2Q9BXF3 1484 aa7.19□□□□□ -1.26
SORT1-202ENST00000466471 CD44P16070 742 aaKnown RBP7.19□□□□□ -1.26
SORT1-202ENST00000466471 SPDYE4A6NLX3 237 aa7.17□□□□□ -1.26
SORT1-202ENST00000466471 CUX2O14529 1486 aa7.16□□□□□ -1.26
SORT1-202ENST00000466471 CC2D2AQ9P2K1 1620 aa7.15□□□□□ -1.27
SORT1-202ENST00000466471 RTN4Q9NQC3 1192 aaKnown RBP7.14□□□□□ -1.27
SORT1-202ENST00000466471 CREBZFQ9NS37 354 aa7.14□□□□□ -1.27
SORT1-202ENST00000466471 BICRAQ9NZM4 1560 aa7.14□□□□□ -1.27
SORT1-202ENST00000466471 STAG3Q9UJ98 1225 aa7.13□□□□□ -1.27
SORT1-202ENST00000466471 NACADO15069 1562 aa7.09□□□□□ -1.27
SORT1-202ENST00000466471 POTEIP0CG38 1075 aa7.09□□□□□ -1.27
SORT1-202ENST00000466471 LHX8Q68G74 356 aa7.09□□□□□ -1.27
SORT1-202ENST00000466471 ZRANB1Q9UGI0 708 aa7.09□□□□□ -1.27
SORT1-202ENST00000466471 TRIM41Q8WV44 630 aa7.06□□□□□ -1.28
SORT1-202ENST00000466471 ZNF579Q8NAF0 562 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms