Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.6□□□□□ -0.07
NR4A1P22736 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.6□□□□□ -0.07
NR4A1P22736 AC023511.2-201ENST00000618803 211 ntBASIC14.6□□□□□ -0.07
NR4A1P22736 AC092865.6-201ENST00000642101 219 ntBASIC14.6□□□□□ -0.07
NR4A1P22736 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR4A1P22736 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR4A1P22736 AC009090.5-201ENST00000624886 2285 ntBASIC14.6□□□□□ -0.07
NR4A1P22736 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR4A1P22736 INTS4P1-203ENST00000641008 3683 ntBASIC14.6□□□□□ -0.07
NR4A1P22736 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR4A1P22736 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR4A1P22736 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR4A1P22736 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR4A1P22736 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NR4A1P22736 AL359183.1-201ENST00000623796 2132 ntBASIC14.6□□□□□ -0.07
NR4A1P22736 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.6□□□□□ -0.07
NR4A1P22736 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.6□□□□□ -0.07
NR4A1P22736 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR4A1P22736 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.6□□□□□ -0.07
NR4A1P22736 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR4A1P22736 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.6□□□□□ -0.07
NR4A1P22736 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.6□□□□□ -0.07
NR4A1P22736 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR4A1P22736 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NR4A1P22736 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 AC025580.3-201ENST00000617932 1424 ntBASIC14.59□□□□□ -0.07
NR4A1P22736 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NR4A1P22736 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.59□□□□□ -0.07
NR4A1P22736 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
NR4A1P22736 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.59□□□□□ -0.07
NR4A1P22736 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.59□□□□□ -0.07
NR4A1P22736 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 MCCD1P2-201ENST00000423228 335 ntBASIC14.59□□□□□ -0.07
NR4A1P22736 DNAJB3-201ENST00000446806 729 ntBASIC14.59□□□□□ -0.07
NR4A1P22736 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NR4A1P22736 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NR4A1P22736 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.59□□□□□ -0.07
NR4A1P22736 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.59□□□□□ -0.07
NR4A1P22736 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.59□□□□□ -0.07
NR4A1P22736 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
NR4A1P22736 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.59□□□□□ -0.07
NR4A1P22736 AC092865.5-201ENST00000545435 363 ntBASIC14.59□□□□□ -0.07
NR4A1P22736 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NR4A1P22736 MIR4492-201ENST00000581627 80 ntBASIC14.59□□□□□ -0.07
NR4A1P22736 MTDHP5-201ENST00000598980 586 ntBASIC14.59□□□□□ -0.07
NR4A1P22736 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NR4A1P22736 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 AL592424.1-201ENST00000563624 1536 ntBASIC14.59□□□□□ -0.07
NR4A1P22736 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.59□□□□□ -0.07
NR4A1P22736 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NR4A1P22736 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 AC008677.1-201ENST00000519230 1561 ntBASIC14.59□□□□□ -0.07
NR4A1P22736 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
NR4A1P22736 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
NR4A1P22736 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NR4A1P22736 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR4A1P22736 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NR4A1P22736 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
NR4A1P22736 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NR4A1P22736 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
NR4A1P22736 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NR4A1P22736 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NR4A1P22736 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
NR4A1P22736 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NR4A1P22736 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NR4A1P22736 COL6A4P2-202ENST00000504443 2753 ntBASIC14.58□□□□□ -0.07
NR4A1P22736 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 AL353732.1-201ENST00000569618 1459 ntBASIC14.58□□□□□ -0.08
NR4A1P22736 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NR4A1P22736 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms