Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CAPN3P20807 KRT8P37-201ENST00000451609 1420 ntBASIC15.08■□□□□ 0
CAPN3P20807 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.08■□□□□ 0
CAPN3P20807 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN3P20807 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN3P20807 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.08■□□□□ 0
CAPN3P20807 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPN3P20807 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.07■□□□□ 0
CAPN3P20807 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CAPN3P20807 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN3P20807 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPN3P20807 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CAPN3P20807 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CAPN3P20807 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN3P20807 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPN3P20807 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CAPN3P20807 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPN3P20807 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CAPN3P20807 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN3P20807 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPN3P20807 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.07■□□□□ 0
CAPN3P20807 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.07■□□□□ 0
CAPN3P20807 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN3P20807 PHKG1P2-201ENST00000457537 863 ntBASIC15.07■□□□□ 0
CAPN3P20807 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.07■□□□□ 0
CAPN3P20807 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.07■□□□□ 0
CAPN3P20807 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.07■□□□□ 0
CAPN3P20807 HNRNPUP1-201ENST00000554987 333 ntBASIC15.07■□□□□ 0
CAPN3P20807 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.07■□□□□ 0
CAPN3P20807 AC005498.2-205ENST00000593218 784 ntBASIC15.07■□□□□ 0
CAPN3P20807 AC097359.3-201ENST00000603982 1210 ntBASIC15.07■□□□□ 0
CAPN3P20807 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.07■□□□□ 0
CAPN3P20807 AC105339.1-204ENST00000636249 355 ntBASIC15.07■□□□□ 0
CAPN3P20807 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN3P20807 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.07■□□□□ 0
CAPN3P20807 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CAPN3P20807 AC067930.6-201ENST00000623257 4947 ntBASIC15.07■□□□□ 0
CAPN3P20807 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN3P20807 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN3P20807 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.07■□□□□ 0
CAPN3P20807 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
CAPN3P20807 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.07■□□□□ 0
CAPN3P20807 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.07■□□□□ 0
CAPN3P20807 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.07■□□□□ 0
CAPN3P20807 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.07■□□□□ 0
CAPN3P20807 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.06■□□□□ 0
CAPN3P20807 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
CAPN3P20807 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CAPN3P20807 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CAPN3P20807 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.06■□□□□ 0
CAPN3P20807 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CAPN3P20807 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.06■□□□□ 0
CAPN3P20807 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.06■□□□□ 0
CAPN3P20807 AC023141.5-201ENST00000458585 616 ntBASIC15.06■□□□□ 0
CAPN3P20807 INGX-202ENST00000489074 768 ntBASIC15.06■□□□□ 0
CAPN3P20807 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.06■□□□□ 0
CAPN3P20807 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.06■□□□□ 0
CAPN3P20807 RNA5SP410-201ENST00000516285 106 ntBASIC15.06■□□□□ 0
CAPN3P20807 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.06■□□□□ 0
CAPN3P20807 AC005225.4-201ENST00000557330 545 ntBASIC15.06■□□□□ 0
CAPN3P20807 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.06■□□□□ 0
CAPN3P20807 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
CAPN3P20807 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.06■□□□□ 0
CAPN3P20807 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.06■□□□□ 0
CAPN3P20807 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.06■□□□□ 0
CAPN3P20807 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.06■□□□□ 0
CAPN3P20807 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
CAPN3P20807 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CAPN3P20807 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CAPN3P20807 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CAPN3P20807 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CAPN3P20807 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.05■□□□□ 0
CAPN3P20807 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CAPN3P20807 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.05■□□□□ 0
CAPN3P20807 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.05■□□□□ 0
CAPN3P20807 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CAPN3P20807 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CAPN3P20807 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.05■□□□□ 0
CAPN3P20807 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.05■□□□□ 0
CAPN3P20807 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.05■□□□□ 0
CAPN3P20807 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms