Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB3BP20337 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB3BP20337 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB3BP20337 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RAB3BP20337 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
RAB3BP20337 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB3BP20337 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RAB3BP20337 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RAB3BP20337 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB3BP20337 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB3BP20337 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
RAB3BP20337 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RAB3BP20337 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB3BP20337 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
RAB3BP20337 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 AKR1C7P-201ENST00000305623 895 ntBASIC13.73□□□□□ -0.21
RAB3BP20337 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.73□□□□□ -0.21
RAB3BP20337 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB3BP20337 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB3BP20337 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.73□□□□□ -0.21
RAB3BP20337 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.73□□□□□ -0.21
RAB3BP20337 MIR4751-201ENST00000578027 74 ntBASIC13.73□□□□□ -0.21
RAB3BP20337 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.73□□□□□ -0.21
RAB3BP20337 MIR3652-201ENST00000579335 131 ntBASIC13.73□□□□□ -0.21
RAB3BP20337 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB3BP20337 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB3BP20337 AC093458.2-201ENST00000623150 629 ntBASIC13.73□□□□□ -0.21
RAB3BP20337 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB3BP20337 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 AC107918.4-201ENST00000641966 3141 ntBASIC13.73□□□□□ -0.21
RAB3BP20337 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB3BP20337 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB3BP20337 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
RAB3BP20337 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB3BP20337 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RAB3BP20337 AP002414.3-201ENST00000589352 1468 ntBASIC13.73□□□□□ -0.21
RAB3BP20337 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.73□□□□□ -0.21
RAB3BP20337 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB3BP20337 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB3BP20337 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RAB3BP20337 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.72□□□□□ -0.21
RAB3BP20337 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RAB3BP20337 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RAB3BP20337 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 TSPY19P-201ENST00000418461 509 ntBASIC13.72□□□□□ -0.21
RAB3BP20337 TSPY18P-201ENST00000441642 509 ntBASIC13.72□□□□□ -0.21
RAB3BP20337 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB3BP20337 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.72□□□□□ -0.21
RAB3BP20337 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.72□□□□□ -0.21
RAB3BP20337 AF238378.1-201ENST00000526806 358 ntBASIC13.72□□□□□ -0.21
RAB3BP20337 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RAB3BP20337 LINC01711-201ENST00000598340 967 ntBASIC13.72□□□□□ -0.21
RAB3BP20337 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.72□□□□□ -0.21
RAB3BP20337 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 ACE3P-201ENST00000423435 1973 ntBASIC13.72□□□□□ -0.21
RAB3BP20337 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.72□□□□□ -0.21
RAB3BP20337 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB3BP20337 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB3BP20337 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB3BP20337 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
RAB3BP20337 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms