Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GAP43P17677 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GAP43P17677 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GAP43P17677 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
GAP43P17677 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GAP43P17677 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
GAP43P17677 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.15■□□□□ 0.34
GAP43P17677 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.15■□□□□ 0.34
GAP43P17677 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GAP43P17677 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.15■□□□□ 0.34
GAP43P17677 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
GAP43P17677 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GAP43P17677 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.15■□□□□ 0.34
GAP43P17677 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.15■□□□□ 0.34
GAP43P17677 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.15■□□□□ 0.34
GAP43P17677 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
GAP43P17677 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
GAP43P17677 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.15■□□□□ 0.34
GAP43P17677 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
GAP43P17677 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GAP43P17677 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
GAP43P17677 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
GAP43P17677 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.14■□□□□ 0.33
GAP43P17677 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
GAP43P17677 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
GAP43P17677 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 AC104457.1-201ENST00000401024 814 ntBASIC17.14■□□□□ 0.33
GAP43P17677 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.14■□□□□ 0.33
GAP43P17677 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
GAP43P17677 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
GAP43P17677 LINC02560-201ENST00000596379 459 ntBASIC17.14■□□□□ 0.33
GAP43P17677 AC008761.3-201ENST00000624803 892 ntBASIC17.14■□□□□ 0.33
GAP43P17677 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.14■□□□□ 0.33
GAP43P17677 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.14■□□□□ 0.33
GAP43P17677 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
GAP43P17677 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GAP43P17677 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GAP43P17677 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.14■□□□□ 0.33
GAP43P17677 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAP43P17677 AL391825.1-201ENST00000457671 1364 ntBASIC17.14■□□□□ 0.33
GAP43P17677 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GAP43P17677 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
GAP43P17677 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GAP43P17677 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAP43P17677 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAP43P17677 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GAP43P17677 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.13■□□□□ 0.33
GAP43P17677 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
GAP43P17677 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GAP43P17677 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAP43P17677 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAP43P17677 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GAP43P17677 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GAP43P17677 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GAP43P17677 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
GAP43P17677 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAP43P17677 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GAP43P17677 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAP43P17677 MIR661-201ENST00000384842 89 ntBASIC17.13■□□□□ 0.33
GAP43P17677 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAP43P17677 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.13■□□□□ 0.33
GAP43P17677 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAP43P17677 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GAP43P17677 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.13■□□□□ 0.33
GAP43P17677 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GAP43P17677 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.13■□□□□ 0.33
GAP43P17677 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms