Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.38■□□□□ 0.21
PDGFRAP16234 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.38■□□□□ 0.21
PDGFRAP16234 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.38■□□□□ 0.21
PDGFRAP16234 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.38■□□□□ 0.21
PDGFRAP16234 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.38■□□□□ 0.21
PDGFRAP16234 AC009118.2-201ENST00000613275 655 ntBASIC16.38■□□□□ 0.21
PDGFRAP16234 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PDGFRAP16234 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.38■□□□□ 0.21
PDGFRAP16234 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.38■□□□□ 0.21
PDGFRAP16234 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.38■□□□□ 0.21
PDGFRAP16234 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.38■□□□□ 0.21
PDGFRAP16234 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFRAP16234 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.37■□□□□ 0.21
PDGFRAP16234 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.37■□□□□ 0.21
PDGFRAP16234 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.37■□□□□ 0.21
PDGFRAP16234 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 AL133267.1-201ENST00000398220 340 ntBASIC16.37■□□□□ 0.21
PDGFRAP16234 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.37■□□□□ 0.21
PDGFRAP16234 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.37■□□□□ 0.21
PDGFRAP16234 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.37■□□□□ 0.21
PDGFRAP16234 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.37■□□□□ 0.21
PDGFRAP16234 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.37■□□□□ 0.21
PDGFRAP16234 AC092337.1-201ENST00000568699 1129 ntBASIC16.37■□□□□ 0.21
PDGFRAP16234 AC015910.1-201ENST00000579400 975 ntBASIC16.37■□□□□ 0.21
PDGFRAP16234 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.37■□□□□ 0.21
PDGFRAP16234 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.37■□□□□ 0.21
PDGFRAP16234 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PDGFRAP16234 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.37■□□□□ 0.21
PDGFRAP16234 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.37■□□□□ 0.21
PDGFRAP16234 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.37■□□□□ 0.21
PDGFRAP16234 AC006486.2-201ENST00000624246 2199 ntBASIC16.37■□□□□ 0.21
PDGFRAP16234 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PDGFRAP16234 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
PDGFRAP16234 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFRAP16234 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFRAP16234 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.36■□□□□ 0.21
PDGFRAP16234 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PDGFRAP16234 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFRAP16234 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.36■□□□□ 0.21
PDGFRAP16234 AC138969.3-201ENST00000546612 1459 ntBASIC16.36■□□□□ 0.21
PDGFRAP16234 AC138932.2-201ENST00000548268 1459 ntBASIC16.36■□□□□ 0.21
PDGFRAP16234 AC126755.4-201ENST00000549796 1459 ntBASIC16.36■□□□□ 0.21
PDGFRAP16234 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFRAP16234 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.36■□□□□ 0.21
PDGFRAP16234 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFRAP16234 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFRAP16234 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.36■□□□□ 0.21
PDGFRAP16234 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFRAP16234 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFRAP16234 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFRAP16234 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFRAP16234 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.36■□□□□ 0.21
PDGFRAP16234 SPDYE18-201ENST00000510091 1050 ntBASIC16.36■□□□□ 0.21
PDGFRAP16234 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.36■□□□□ 0.21
PDGFRAP16234 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.36■□□□□ 0.21
PDGFRAP16234 AC104794.3-201ENST00000566840 1248 ntBASIC16.36■□□□□ 0.21
PDGFRAP16234 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFRAP16234 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.36■□□□□ 0.21
PDGFRAP16234 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.36■□□□□ 0.21
PDGFRAP16234 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.36■□□□□ 0.21
PDGFRAP16234 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.36■□□□□ 0.21
PDGFRAP16234 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFRAP16234 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFRAP16234 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.36■□□□□ 0.21
PDGFRAP16234 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFRAP16234 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.36■□□□□ 0.21
PDGFRAP16234 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFRAP16234 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PDGFRAP16234 AC023157.3-201ENST00000619086 2088 ntBASIC16.36■□□□□ 0.21
PDGFRAP16234 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PDGFRAP16234 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.36■□□□□ 0.21
PDGFRAP16234 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFRAP16234 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms