Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
UBCP0CG48 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.75□□□□□ -0.21
UBCP0CG48 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
UBCP0CG48 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.75□□□□□ -0.21
UBCP0CG48 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
UBCP0CG48 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.75□□□□□ -0.21
UBCP0CG48 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.75□□□□□ -0.21
UBCP0CG48 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
UBCP0CG48 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
UBCP0CG48 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.74□□□□□ -0.21
UBCP0CG48 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.74□□□□□ -0.21
UBCP0CG48 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
UBCP0CG48 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
UBCP0CG48 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.74□□□□□ -0.21
UBCP0CG48 AL137784.3-201ENST00000623858 2288 ntBASIC13.74□□□□□ -0.21
UBCP0CG48 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
UBCP0CG48 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.74□□□□□ -0.21
UBCP0CG48 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.74□□□□□ -0.21
UBCP0CG48 AC136604.1-201ENST00000418535 575 ntBASIC13.74□□□□□ -0.21
UBCP0CG48 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.74□□□□□ -0.21
UBCP0CG48 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
UBCP0CG48 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
UBCP0CG48 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.74□□□□□ -0.21
UBCP0CG48 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.74□□□□□ -0.21
UBCP0CG48 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.74□□□□□ -0.21
UBCP0CG48 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.74□□□□□ -0.21
UBCP0CG48 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.74□□□□□ -0.21
UBCP0CG48 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.74□□□□□ -0.21
UBCP0CG48 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.74□□□□□ -0.21
UBCP0CG48 AC097359.3-201ENST00000603982 1210 ntBASIC13.74□□□□□ -0.21
UBCP0CG48 AC120114.3-201ENST00000611923 658 ntBASIC13.74□□□□□ -0.21
UBCP0CG48 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
UBCP0CG48 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.74□□□□□ -0.21
UBCP0CG48 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
UBCP0CG48 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
UBCP0CG48 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
UBCP0CG48 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.74□□□□□ -0.21
UBCP0CG48 AC013726.1-201ENST00000563747 2285 ntBASIC13.74□□□□□ -0.21
UBCP0CG48 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
UBCP0CG48 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
UBCP0CG48 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 AC007191.1-201ENST00000623179 2995 ntBASIC13.74□□□□□ -0.21
UBCP0CG48 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
UBCP0CG48 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
UBCP0CG48 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBCP0CG48 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.74□□□□□ -0.21
UBCP0CG48 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
UBCP0CG48 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
UBCP0CG48 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.73□□□□□ -0.21
UBCP0CG48 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.73□□□□□ -0.21
UBCP0CG48 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.73□□□□□ -0.21
UBCP0CG48 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
UBCP0CG48 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
UBCP0CG48 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms