Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CD48P09326 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CD48P09326 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CD48P09326 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.16■□□□□ 0.18
CD48P09326 AC241585.1-201ENST00000433527 519 ntBASIC16.16■□□□□ 0.18
CD48P09326 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.16■□□□□ 0.18
CD48P09326 SPDYE18-201ENST00000510091 1050 ntBASIC16.16■□□□□ 0.18
CD48P09326 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
CD48P09326 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.16■□□□□ 0.18
CD48P09326 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.16■□□□□ 0.18
CD48P09326 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.16■□□□□ 0.18
CD48P09326 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.16■□□□□ 0.18
CD48P09326 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.16■□□□□ 0.18
CD48P09326 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.16■□□□□ 0.18
CD48P09326 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD48P09326 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CD48P09326 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CD48P09326 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD48P09326 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.15■□□□□ 0.18
CD48P09326 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.15■□□□□ 0.18
CD48P09326 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD48P09326 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.15■□□□□ 0.18
CD48P09326 AL121723.1-201ENST00000445194 1519 ntBASIC16.15■□□□□ 0.18
CD48P09326 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.15■□□□□ 0.18
CD48P09326 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD48P09326 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD48P09326 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD48P09326 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD48P09326 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.15■□□□□ 0.18
CD48P09326 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.15■□□□□ 0.18
CD48P09326 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD48P09326 TOMM22P5-201ENST00000416399 439 ntBASIC16.15■□□□□ 0.18
CD48P09326 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.15■□□□□ 0.18
CD48P09326 AC055876.3-201ENST00000431496 288 ntBASIC16.15■□□□□ 0.18
CD48P09326 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CD48P09326 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.15■□□□□ 0.18
CD48P09326 ZNF890P-202ENST00000530367 1156 ntBASIC16.15■□□□□ 0.18
CD48P09326 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CD48P09326 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.15■□□□□ 0.18
CD48P09326 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD48P09326 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.15■□□□□ 0.18
CD48P09326 AC138649.4-201ENST00000612222 287 ntBASIC16.15■□□□□ 0.18
CD48P09326 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD48P09326 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD48P09326 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CD48P09326 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD48P09326 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD48P09326 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD48P09326 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.14■□□□□ 0.17
CD48P09326 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.14■□□□□ 0.17
CD48P09326 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.14■□□□□ 0.17
CD48P09326 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CD48P09326 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.14■□□□□ 0.17
CD48P09326 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.14■□□□□ 0.17
CD48P09326 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.14■□□□□ 0.17
CD48P09326 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.14■□□□□ 0.17
CD48P09326 AL589987.1-201ENST00000453380 819 ntBASIC16.14■□□□□ 0.17
CD48P09326 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.14■□□□□ 0.17
CD48P09326 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CD48P09326 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.14■□□□□ 0.17
CD48P09326 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CD48P09326 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CD48P09326 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.14■□□□□ 0.17
CD48P09326 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CD48P09326 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD48P09326 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms