Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
LMNAP02545 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.39■□□□□ 0.21
LMNAP02545 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.39■□□□□ 0.21
LMNAP02545 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LMNAP02545 TOP3BP1-201ENST00000420768 1380 ntBASIC16.38■□□□□ 0.21
LMNAP02545 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LMNAP02545 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.38■□□□□ 0.21
LMNAP02545 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.38■□□□□ 0.21
LMNAP02545 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.38■□□□□ 0.21
LMNAP02545 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LMNAP02545 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
LMNAP02545 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LMNAP02545 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LMNAP02545 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.38■□□□□ 0.21
LMNAP02545 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.38■□□□□ 0.21
LMNAP02545 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.38■□□□□ 0.21
LMNAP02545 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.38■□□□□ 0.21
LMNAP02545 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LMNAP02545 MIR3615-201ENST00000581999 87 ntBASIC16.38■□□□□ 0.21
LMNAP02545 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.38■□□□□ 0.21
LMNAP02545 MIR6727-201ENST00000620702 65 ntBASIC16.38■□□□□ 0.21
LMNAP02545 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.38■□□□□ 0.21
LMNAP02545 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.38■□□□□ 0.21
LMNAP02545 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.38■□□□□ 0.21
LMNAP02545 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.38■□□□□ 0.21
LMNAP02545 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.38■□□□□ 0.21
LMNAP02545 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMNAP02545 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LMNAP02545 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LMNAP02545 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 AP005117.1-202ENST00000581724 1908 ntBASIC16.37■□□□□ 0.21
LMNAP02545 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.37■□□□□ 0.21
LMNAP02545 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.37■□□□□ 0.21
LMNAP02545 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LMNAP02545 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.37■□□□□ 0.21
LMNAP02545 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
LMNAP02545 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LMNAP02545 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.37■□□□□ 0.21
LMNAP02545 FAM21FP-201ENST00000426241 1131 ntBASIC16.37■□□□□ 0.21
LMNAP02545 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 AC108725.1-201ENST00000495472 409 ntBASIC16.37■□□□□ 0.21
LMNAP02545 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.37■□□□□ 0.21
LMNAP02545 RNA5SP423-201ENST00000517127 109 ntBASIC16.37■□□□□ 0.21
LMNAP02545 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.37■□□□□ 0.21
LMNAP02545 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.37■□□□□ 0.21
LMNAP02545 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.37■□□□□ 0.21
LMNAP02545 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.37■□□□□ 0.21
LMNAP02545 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LMNAP02545 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.37■□□□□ 0.21
LMNAP02545 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 AC023157.3-201ENST00000619086 2088 ntBASIC16.37■□□□□ 0.21
LMNAP02545 EGFEM1P-202ENST00000431685 1563 ntBASIC16.37■□□□□ 0.21
LMNAP02545 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 AC093525.8-201ENST00000624099 1342 ntBASIC16.37■□□□□ 0.21
LMNAP02545 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
LMNAP02545 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMNAP02545 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms