Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ABCA1O95477 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ABCA1O95477 AC006033.1-201ENST00000440505 426 ntBASIC13.14□□□□□ -0.31
ABCA1O95477 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.14□□□□□ -0.31
ABCA1O95477 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.14□□□□□ -0.31
ABCA1O95477 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.14□□□□□ -0.31
ABCA1O95477 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ABCA1O95477 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.14□□□□□ -0.31
ABCA1O95477 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.14□□□□□ -0.31
ABCA1O95477 MIR4321-201ENST00000592276 80 ntBASIC13.14□□□□□ -0.31
ABCA1O95477 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ABCA1O95477 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ABCA1O95477 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.14□□□□□ -0.31
ABCA1O95477 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.14□□□□□ -0.31
ABCA1O95477 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.14□□□□□ -0.31
ABCA1O95477 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ABCA1O95477 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ABCA1O95477 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.13□□□□□ -0.31
ABCA1O95477 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.13□□□□□ -0.31
ABCA1O95477 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ABCA1O95477 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
ABCA1O95477 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.13□□□□□ -0.31
ABCA1O95477 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
ABCA1O95477 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.13□□□□□ -0.31
ABCA1O95477 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.13□□□□□ -0.31
ABCA1O95477 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ABCA1O95477 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.13□□□□□ -0.31
ABCA1O95477 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ABCA1O95477 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.13□□□□□ -0.31
ABCA1O95477 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.13□□□□□ -0.31
ABCA1O95477 AC244093.1-201ENST00000610837 814 ntBASIC13.13□□□□□ -0.31
ABCA1O95477 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 GGT3P-204ENST00000453783 1664 ntBASIC13.13□□□□□ -0.31
ABCA1O95477 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ABCA1O95477 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.13□□□□□ -0.31
ABCA1O95477 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.13□□□□□ -0.31
ABCA1O95477 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
ABCA1O95477 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.13□□□□□ -0.31
ABCA1O95477 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.13□□□□□ -0.31
ABCA1O95477 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.13□□□□□ -0.31
ABCA1O95477 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.13□□□□□ -0.31
ABCA1O95477 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.13□□□□□ -0.31
ABCA1O95477 AC012441.1-201ENST00000446669 685 ntBASIC13.13□□□□□ -0.31
ABCA1O95477 RPL13AP20-201ENST00000459725 609 ntBASIC13.13□□□□□ -0.31
ABCA1O95477 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.13□□□□□ -0.31
ABCA1O95477 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.13□□□□□ -0.31
ABCA1O95477 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.13□□□□□ -0.31
ABCA1O95477 DUX4L45-201ENST00000566406 1057 ntBASIC13.13□□□□□ -0.31
ABCA1O95477 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.13□□□□□ -0.31
ABCA1O95477 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.13□□□□□ -0.31
ABCA1O95477 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ABCA1O95477 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ABCA1O95477 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ABCA1O95477 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ABCA1O95477 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ABCA1O95477 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ABCA1O95477 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ABCA1O95477 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ABCA1O95477 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ABCA1O95477 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ABCA1O95477 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.12□□□□□ -0.31
ABCA1O95477 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ABCA1O95477 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ABCA1O95477 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.12□□□□□ -0.31
ABCA1O95477 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.12□□□□□ -0.31
ABCA1O95477 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.12□□□□□ -0.31
ABCA1O95477 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.12□□□□□ -0.31
ABCA1O95477 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.12□□□□□ -0.31
ABCA1O95477 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.12□□□□□ -0.31
ABCA1O95477 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ABCA1O95477 RHOQP1-201ENST00000555758 579 ntBASIC13.12□□□□□ -0.31
ABCA1O95477 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.12□□□□□ -0.31
ABCA1O95477 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.12□□□□□ -0.31
ABCA1O95477 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms