Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.87■□□□□ 0.13
PMPCBO75439 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
PMPCBO75439 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PMPCBO75439 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.87■□□□□ 0.13
PMPCBO75439 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.87■□□□□ 0.13
PMPCBO75439 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.87■□□□□ 0.13
PMPCBO75439 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.87■□□□□ 0.13
PMPCBO75439 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PMPCBO75439 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.87■□□□□ 0.13
PMPCBO75439 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PMPCBO75439 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.87■□□□□ 0.13
PMPCBO75439 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.87■□□□□ 0.13
PMPCBO75439 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.87■□□□□ 0.13
PMPCBO75439 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.87■□□□□ 0.13
PMPCBO75439 AC009477.1-201ENST00000452936 217 ntBASIC15.87■□□□□ 0.13
PMPCBO75439 CYMP-203ENST00000474680 1263 ntBASIC15.87■□□□□ 0.13
PMPCBO75439 AC004890.2-204ENST00000481968 304 ntBASIC15.87■□□□□ 0.13
PMPCBO75439 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.87■□□□□ 0.13
PMPCBO75439 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PMPCBO75439 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.87■□□□□ 0.13
PMPCBO75439 AC004461.2-201ENST00000629517 803 ntBASIC15.87■□□□□ 0.13
PMPCBO75439 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PMPCBO75439 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PMPCBO75439 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PMPCBO75439 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.87■□□□□ 0.13
PMPCBO75439 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PMPCBO75439 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.87■□□□□ 0.13
PMPCBO75439 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.87■□□□□ 0.13
PMPCBO75439 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMPCBO75439 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
PMPCBO75439 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.86■□□□□ 0.13
PMPCBO75439 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.86■□□□□ 0.13
PMPCBO75439 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
PMPCBO75439 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PMPCBO75439 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.86■□□□□ 0.13
PMPCBO75439 PCDHA3-202ENST00000532566 4594 ntBASIC15.86■□□□□ 0.13
PMPCBO75439 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PMPCBO75439 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.86■□□□□ 0.13
PMPCBO75439 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PMPCBO75439 BASP1P1-201ENST00000430708 665 ntBASIC15.86■□□□□ 0.13
PMPCBO75439 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.86■□□□□ 0.13
PMPCBO75439 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.86■□□□□ 0.13
PMPCBO75439 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PMPCBO75439 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.86■□□□□ 0.13
PMPCBO75439 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.86■□□□□ 0.13
PMPCBO75439 ZNF890P-202ENST00000530367 1156 ntBASIC15.86■□□□□ 0.13
PMPCBO75439 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.86■□□□□ 0.13
PMPCBO75439 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.86■□□□□ 0.13
PMPCBO75439 AC027796.2-201ENST00000575326 344 ntBASIC15.86■□□□□ 0.13
PMPCBO75439 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.86■□□□□ 0.13
PMPCBO75439 AC008738.7-201ENST00000609744 511 ntBASIC15.86■□□□□ 0.13
PMPCBO75439 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.86■□□□□ 0.13
PMPCBO75439 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.86■□□□□ 0.13
PMPCBO75439 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.86■□□□□ 0.13
PMPCBO75439 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
PMPCBO75439 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
PMPCBO75439 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMPCBO75439 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.86■□□□□ 0.13
PMPCBO75439 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PMPCBO75439 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.85■□□□□ 0.13
PMPCBO75439 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PMPCBO75439 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms