Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLC28A2O43868 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC28A2O43868 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC28A2O43868 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC28A2O43868 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SLC28A2O43868 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC28A2O43868 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC28A2O43868 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLC28A2O43868 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC28A2O43868 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC28A2O43868 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SLC28A2O43868 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC28A2O43868 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
SLC28A2O43868 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
SLC28A2O43868 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC28A2O43868 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
SLC28A2O43868 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SLC28A2O43868 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC28A2O43868 RPL37AP1-201ENST00000412502 279 ntBASIC15.1■□□□□ 0.01
SLC28A2O43868 AC142381.1-201ENST00000426099 345 ntBASIC15.1■□□□□ 0.01
SLC28A2O43868 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLC28A2O43868 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 AC105233.2-201ENST00000523697 349 ntBASIC15.1■□□□□ 0.01
SLC28A2O43868 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC28A2O43868 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC28A2O43868 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 AF228730.5-201ENST00000530288 346 ntBASIC15.1■□□□□ 0.01
SLC28A2O43868 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC28A2O43868 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC28A2O43868 RN7SL190P-201ENST00000582519 257 ntBASIC15.1■□□□□ 0.01
SLC28A2O43868 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC28A2O43868 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC28A2O43868 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC28A2O43868 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SLC28A2O43868 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SLC28A2O43868 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
SLC28A2O43868 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC28A2O43868 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC28A2O43868 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC28A2O43868 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC28A2O43868 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC28A2O43868 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC28A2O43868 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC28A2O43868 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC28A2O43868 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
SLC28A2O43868 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC28A2O43868 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC28A2O43868 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC28A2O43868 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SLC28A2O43868 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SLC28A2O43868 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC28A2O43868 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC28A2O43868 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC28A2O43868 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC28A2O43868 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC28A2O43868 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC28A2O43868 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC28A2O43868 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC28A2O43868 AC007389.4-201ENST00000454674 793 ntBASIC15.09■□□□□ 0.01
SLC28A2O43868 AC099548.2-209ENST00000480264 625 ntBASIC15.09■□□□□ 0.01
SLC28A2O43868 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC28A2O43868 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC28A2O43868 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC28A2O43868 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SLC28A2O43868 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC28A2O43868 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC28A2O43868 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC28A2O43868 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC28A2O43868 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms