Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ACTN4O43707 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ACTN4O43707 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ACTN4O43707 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ACTN4O43707 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ACTN4O43707 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ACTN4O43707 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ACTN4O43707 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
ACTN4O43707 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ACTN4O43707 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ACTN4O43707 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.49■□□□□ 0.39
ACTN4O43707 TSEN15P1-201ENST00000423257 515 ntBASIC17.49■□□□□ 0.39
ACTN4O43707 GHSR-202ENST00000427970 912 ntBASIC17.49■□□□□ 0.39
ACTN4O43707 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ACTN4O43707 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC17.49■□□□□ 0.39
ACTN4O43707 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.49■□□□□ 0.39
ACTN4O43707 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.49■□□□□ 0.39
ACTN4O43707 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
ACTN4O43707 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ACTN4O43707 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.49■□□□□ 0.39
ACTN4O43707 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.49■□□□□ 0.39
ACTN4O43707 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ACTN4O43707 FAM45BP-202ENST00000592932 1624 ntBASIC17.49■□□□□ 0.39
ACTN4O43707 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
ACTN4O43707 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ACTN4O43707 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ACTN4O43707 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ACTN4O43707 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ACTN4O43707 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.49■□□□□ 0.39
ACTN4O43707 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTN4O43707 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ACTN4O43707 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ACTN4O43707 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
ACTN4O43707 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTN4O43707 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ACTN4O43707 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
ACTN4O43707 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.48■□□□□ 0.39
ACTN4O43707 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.48■□□□□ 0.39
ACTN4O43707 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTN4O43707 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.48■□□□□ 0.39
ACTN4O43707 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTN4O43707 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ACTN4O43707 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ACTN4O43707 FLJ16779-201ENST00000612722 7638 ntBASIC17.48■□□□□ 0.39
ACTN4O43707 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTN4O43707 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.48■□□□□ 0.39
ACTN4O43707 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ACTN4O43707 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTN4O43707 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.48■□□□□ 0.39
ACTN4O43707 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ACTN4O43707 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ACTN4O43707 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ACTN4O43707 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.47■□□□□ 0.39
ACTN4O43707 FGD5P1-202ENST00000614866 2498 ntBASIC17.47■□□□□ 0.39
ACTN4O43707 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.47■□□□□ 0.39
ACTN4O43707 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ACTN4O43707 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ACTN4O43707 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
ACTN4O43707 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ACTN4O43707 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms