Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.62□□□□□ -0.23
XRCC2O43543 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
XRCC2O43543 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 MYO15B-237ENST00000642007 4893 ntBASIC13.62□□□□□ -0.23
XRCC2O43543 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
XRCC2O43543 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.61□□□□□ -0.23
XRCC2O43543 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
XRCC2O43543 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
XRCC2O43543 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
XRCC2O43543 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.61□□□□□ -0.23
XRCC2O43543 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.61□□□□□ -0.23
XRCC2O43543 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.61□□□□□ -0.23
XRCC2O43543 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
XRCC2O43543 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 RPL5P21-201ENST00000404620 815 ntBASIC13.61□□□□□ -0.23
XRCC2O43543 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.61□□□□□ -0.23
XRCC2O43543 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.61□□□□□ -0.23
XRCC2O43543 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.61□□□□□ -0.23
XRCC2O43543 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.61□□□□□ -0.23
XRCC2O43543 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.61□□□□□ -0.23
XRCC2O43543 AC125807.1-201ENST00000483097 614 ntBASIC13.61□□□□□ -0.23
XRCC2O43543 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.61□□□□□ -0.23
XRCC2O43543 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.61□□□□□ -0.23
XRCC2O43543 AC109322.1-201ENST00000524499 1264 ntBASIC13.61□□□□□ -0.23
XRCC2O43543 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.61□□□□□ -0.23
XRCC2O43543 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
XRCC2O43543 AC015911.4-201ENST00000588022 1070 ntBASIC13.61□□□□□ -0.23
XRCC2O43543 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.61□□□□□ -0.23
XRCC2O43543 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.61□□□□□ -0.23
XRCC2O43543 AC023511.2-201ENST00000618803 211 ntBASIC13.61□□□□□ -0.23
XRCC2O43543 Z92544.3-201ENST00000624747 417 ntBASIC13.61□□□□□ -0.23
XRCC2O43543 AL033527.5-202ENST00000641632 1098 ntBASIC13.61□□□□□ -0.23
XRCC2O43543 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.61□□□□□ -0.23
XRCC2O43543 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
XRCC2O43543 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
XRCC2O43543 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.61□□□□□ -0.23
XRCC2O43543 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.61□□□□□ -0.23
XRCC2O43543 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.61□□□□□ -0.23
XRCC2O43543 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
XRCC2O43543 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
XRCC2O43543 TUBB3P1-201ENST00000405796 1332 ntBASIC13.61□□□□□ -0.23
XRCC2O43543 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
XRCC2O43543 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
XRCC2O43543 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.6□□□□□ -0.23
XRCC2O43543 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
XRCC2O43543 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.6□□□□□ -0.23
XRCC2O43543 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.6□□□□□ -0.23
XRCC2O43543 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
XRCC2O43543 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
XRCC2O43543 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
XRCC2O43543 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
XRCC2O43543 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.6□□□□□ -0.23
XRCC2O43543 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.6□□□□□ -0.23
XRCC2O43543 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.6□□□□□ -0.23
XRCC2O43543 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.6□□□□□ -0.23
XRCC2O43543 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
XRCC2O43543 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
XRCC2O43543 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
XRCC2O43543 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
XRCC2O43543 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
XRCC2O43543 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
XRCC2O43543 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.6□□□□□ -0.23
XRCC2O43543 TARDBPP1-201ENST00000442013 1203 ntBASIC13.6□□□□□ -0.23
XRCC2O43543 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.6□□□□□ -0.23
XRCC2O43543 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.6□□□□□ -0.23
XRCC2O43543 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
XRCC2O43543 SLED1-202ENST00000512051 380 ntBASIC13.6□□□□□ -0.23
XRCC2O43543 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.6□□□□□ -0.23
XRCC2O43543 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.6□□□□□ -0.23
XRCC2O43543 AC069120.2-201ENST00000524091 540 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms