Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CCL21O00585 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCL21O00585 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCL21O00585 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL21O00585 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CCL21O00585 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL21O00585 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL21O00585 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CCL21O00585 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL21O00585 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL21O00585 HINT2P1-201ENST00000419438 481 ntBASIC13.63□□□□□ -0.23
CCL21O00585 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
CCL21O00585 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.63□□□□□ -0.23
CCL21O00585 RN7SL769P-201ENST00000469386 295 ntBASIC13.63□□□□□ -0.23
CCL21O00585 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL21O00585 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CCL21O00585 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL21O00585 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CCL21O00585 CU633904.3-201ENST00000624042 1029 ntBASIC13.63□□□□□ -0.23
CCL21O00585 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CCL21O00585 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL21O00585 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCL21O00585 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL21O00585 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CCL21O00585 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL21O00585 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL21O00585 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CCL21O00585 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.62□□□□□ -0.23
CCL21O00585 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CCL21O00585 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCL21O00585 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL21O00585 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL21O00585 AC004066.1-201ENST00000502488 802 ntBASIC13.62□□□□□ -0.23
CCL21O00585 AC245884.6-201ENST00000515672 1067 ntBASIC13.62□□□□□ -0.23
CCL21O00585 MIR3619-201ENST00000579667 83 ntBASIC13.62□□□□□ -0.23
CCL21O00585 PPY2P-201ENST00000582808 702 ntBASIC13.62□□□□□ -0.23
CCL21O00585 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCL21O00585 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL21O00585 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.62□□□□□ -0.23
CCL21O00585 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.62□□□□□ -0.23
CCL21O00585 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CCL21O00585 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL21O00585 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL21O00585 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
CCL21O00585 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL21O00585 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL21O00585 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 AC018695.7-201ENST00000624587 2492 ntBASIC13.62□□□□□ -0.23
CCL21O00585 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL21O00585 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL21O00585 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL21O00585 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL21O00585 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms