Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 AL133215.2-201ENST00000609242 977 ntBASIC16.59■□□□□ 0.25
RCCD1A6NED2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCCD1A6NED2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.59■□□□□ 0.25
RCCD1A6NED2 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RCCD1A6NED2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
RCCD1A6NED2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RCCD1A6NED2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.58■□□□□ 0.25
RCCD1A6NED2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
RCCD1A6NED2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.58■□□□□ 0.24
RCCD1A6NED2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RCCD1A6NED2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RCCD1A6NED2 YBX2P1-201ENST00000394192 760 ntBASIC16.58■□□□□ 0.24
RCCD1A6NED2 SPDYE17-201ENST00000412399 783 ntBASIC16.58■□□□□ 0.24
RCCD1A6NED2 MCCD1P2-201ENST00000423228 335 ntBASIC16.58■□□□□ 0.24
RCCD1A6NED2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 FAM58DP-201ENST00000428076 619 ntBASIC16.58■□□□□ 0.24
RCCD1A6NED2 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.58■□□□□ 0.24
RCCD1A6NED2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.58■□□□□ 0.24
RCCD1A6NED2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
RCCD1A6NED2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.58■□□□□ 0.24
RCCD1A6NED2 AC120114.3-201ENST00000611923 658 ntBASIC16.58■□□□□ 0.24
RCCD1A6NED2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RCCD1A6NED2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCCD1A6NED2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.57■□□□□ 0.24
RCCD1A6NED2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
RCCD1A6NED2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.57■□□□□ 0.24
RCCD1A6NED2 AC027601.5-201ENST00000624065 2482 ntBASIC16.57■□□□□ 0.24
RCCD1A6NED2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
RCCD1A6NED2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms