Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 TMBIM7P-203ENST00000641617 1718 ntBASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 AZGP1P1-201ENST00000411909 902 ntBASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 TSEN15P1-201ENST00000423257 515 ntBASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 AC027612.4-201ENST00000605371 583 ntBASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 PPT1-215ENST00000641471 2368 ntBASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV1A0A0A0MS02 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 CNN2P2-201ENST00000443536 909 ntBASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 EEF1DP4-201ENST00000446006 880 ntBASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 CNN2P3-201ENST00000450201 906 ntBASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 SERBP1P3-201ENST00000459980 809 ntBASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 BANF1P1-201ENST00000553684 263 ntBASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 AL136317.3-201ENST00000618497 906 ntBASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 AC023511.2-201ENST00000618803 211 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms