Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX49Q9Y6V7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 AF228730.6-201ENST00000641497 218 ntBASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 AC084121.3-201ENST00000641716 218 ntBASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 AC105233.6-201ENST00000642093 218 ntBASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 AC091951.1-201ENST00000512854 2465 ntBASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 PCDHA3-202ENST00000532566 4594 ntBASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX49Q9Y6V7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
DDX49Q9Y6V7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.83■□□□□ 0.61
DDX49Q9Y6V7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC18.83■□□□□ 0.61
DDX49Q9Y6V7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
DDX49Q9Y6V7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
DDX49Q9Y6V7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DDX49Q9Y6V7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC18.83■□□□□ 0.61
DDX49Q9Y6V7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC18.83■□□□□ 0.61
DDX49Q9Y6V7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DDX49Q9Y6V7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDX49Q9Y6V7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDX49Q9Y6V7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC18.83■□□□□ 0.61
DDX49Q9Y6V7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDX49Q9Y6V7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDX49Q9Y6V7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDX49Q9Y6V7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 AL158211.3-201ENST00000607385 239 ntBASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 AC021097.1-201ENST00000607902 574 ntBASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 CICP23-201ENST00000605013 2741 ntBASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 AC073439.1-201ENST00000624121 1774 ntBASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
DDX49Q9Y6V7 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX49Q9Y6V7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms